6 homologs were found in PanDaTox collection
for query gene Shel_00620 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_00620    100 
 
 
900 bp  1784    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_27250  anaerobic dehydrogenase, typically selenocysteine-containing  90.38 
 
 
2883 bp  63.9  0.00000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1190  molybdopterin oxidoreductase  88.68 
 
 
2865 bp  58  0.000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.537056 
 
 
-
 
NC_013204  Elen_2374  Nitrate reductase  100 
 
 
2466 bp  52  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  0.037868  normal  0.51028 
 
 
-
 
NC_013165  Shel_27570  anaerobic dehydrogenase, typically selenocysteine-containing  93.94 
 
 
2790 bp  50.1  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.805865  normal 
 
 
-
 
NC_011830  Dhaf_2333  molybdopterin oxidoreductase  91.67 
 
 
2643 bp  48.1  0.004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
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