More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2988 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2988  3-isopropylmalate dehydratase, small subunit  100 
 
 
165 aa  342  1e-93  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.169045  normal 
 
 
-
 
NC_008554  Sfum_3030  3-isopropylmalate dehydratase, small subunit  100 
 
 
165 aa  342  1e-93  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.538319 
 
 
-
 
NC_013216  Dtox_0597  3-isopropylmalate dehydrogenase  64.2 
 
 
523 aa  225  2e-58  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00000598819  normal 
 
 
-
 
NC_010730  SYO3AOP1_0338  3-isopropylmalate dehydratase, small subunit  58.64 
 
 
165 aa  219  1.9999999999999999e-56  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.0000000000213768  n/a   
 
 
-
 
NC_010424  Daud_0357  3-isopropylmalate dehydratase, small subunit  60.12 
 
 
164 aa  218  3e-56  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.427238  n/a   
 
 
-
 
NC_011898  Ccel_0127  3-isopropylmalate dehydratase small subunit  58.28 
 
 
163 aa  218  3.9999999999999997e-56  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1192  3-isopropylmalate dehydratase, small subunit  59.76 
 
 
168 aa  217  6e-56  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2486  3-isopropylmalate dehydratase, small subunit  61.04 
 
 
162 aa  215  2e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2210  3-isopropylmalate dehydratase, small subunit  60.49 
 
 
189 aa  215  2e-55  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.0000117372  n/a   
 
 
-
 
NC_013552  DhcVS_731  3-isopropylmalate dehydratase, small subunit  62.35 
 
 
166 aa  214  4e-55  Dehalococcoides sp. VS  Bacteria  normal  0.0550473  n/a   
 
 
-
 
NC_009455  DehaBAV1_0746  3-isopropylmalate dehydratase small subunit  62.35 
 
 
166 aa  213  7e-55  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0039277  n/a   
 
 
-
 
NC_002936  DET0827  3-isopropylmalate dehydratase small subunit  61.73 
 
 
166 aa  212  1.9999999999999998e-54  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2100  3-isopropylmalate dehydratase small subunit  59.51 
 
 
166 aa  212  1.9999999999999998e-54  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00749076  n/a   
 
 
-
 
NC_009253  Dred_0287  3-isopropylmalate dehydratase, small subunit  58.02 
 
 
166 aa  211  2.9999999999999995e-54  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3355  3-isopropylmalate dehydratase small subunit  59.88 
 
 
165 aa  210  9e-54  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1364  alginate O-acetylation protein  59.75 
 
 
160 aa  208  3e-53  Campylobacter curvus 525.92  Bacteria  normal  0.0200194  n/a   
 
 
-
 
NC_010003  Pmob_1587  3-isopropylmalate dehydratase, small subunit  57.06 
 
 
164 aa  207  4e-53  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0228  3-isopropylmalate dehydratase, small subunit  58.28 
 
 
163 aa  207  5e-53  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0016  3-isopropylmalate dehydratase small subunit  57.5 
 
 
160 aa  207  7e-53  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2141  3-isopropylmalate dehydratase, small subunit  61.01 
 
 
163 aa  207  8e-53  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0035  3-isopropylmalate dehydratase small subunit  58.13 
 
 
161 aa  206  1e-52  Campylobacter concisus 13826  Bacteria  normal  0.158163  n/a   
 
 
-
 
NC_013204  Elen_0584  3-isopropylmalate dehydratase, small subunit  56.36 
 
 
165 aa  205  2e-52  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00990382  normal 
 
 
-
 
NC_007575  Suden_1102  3-isopropylmalate dehydratase small subunit  58.54 
 
 
167 aa  205  3e-52  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1265  3-isopropylmalate dehydratase small subunit  61.39 
 
 
159 aa  204  4e-52  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2221  3-isopropylmalate dehydratase, small subunit  54.04 
 
 
162 aa  198  3e-50  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2253  3-isopropylmalate dehydratase small subunit  64.2 
 
 
166 aa  197  5e-50  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_1021  3-isopropylmalate dehydratase small subunit  60.13 
 
 
159 aa  197  6e-50  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000213685  n/a   
 
 
-
 
NC_013512  Sdel_1517  3-isopropylmalate dehydratase, small subunit  58.75 
 
 
162 aa  196  1.0000000000000001e-49  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.292796  n/a   
 
 
-
 
NC_013170  Ccur_04380  3-isopropylmalate dehydratase, small subunit  52.76 
 
 
178 aa  194  4.0000000000000005e-49  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.96235 
 
 
-
 
NC_011899  Hore_10880  3-isopropylmalate dehydratase, small subunit  58.49 
 
 
165 aa  194  4.0000000000000005e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1135  3-isopropylmalate dehydratase, small subunit  54.66 
 
 
167 aa  193  7e-49  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_0816  3-isopropylmalate dehydratase, small subunit  55.28 
 
 
167 aa  193  8.000000000000001e-49  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007519  Dde_3220  3-isopropylmalate dehydratase small subunit  55.21 
 
 
167 aa  193  1e-48  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1540  3-isopropylmalate dehydratase, small subunit  54.66 
 
 
167 aa  192  1e-48  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1338  3-isopropylmalate dehydratase small subunit  55.28 
 
 
162 aa  191  3e-48  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013223  Dret_1457  3-isopropylmalate dehydratase small subunit  55.83 
 
 
167 aa  191  5e-48  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.376362  normal  0.219232 
 
 
-
 
NC_008553  Mthe_0024  3-isopropylmalate dehydratase small subunit  55.41 
 
 
161 aa  190  9e-48  Methanosaeta thermophila PT  Archaea  normal  0.321106  n/a   
 
 
-
 
NC_009634  Mevan_1141  3-isopropylmalate dehydratase, small subunit  55.62 
 
 
167 aa  189  1e-47  Methanococcus vannielii SB  Archaea  normal  0.685222  n/a   
 
 
-
 
NC_013522  Taci_1611  3-isopropylmalate dehydratase, small subunit  56.52 
 
 
167 aa  189  1e-47  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0389  3-isopropylmalate dehydratase small subunit  54.55 
 
 
167 aa  189  1e-47  Desulfovibrio vulgaris DP4  Bacteria  normal  0.373722  normal 
 
 
-
 
NC_011769  DvMF_1793  3-isopropylmalate dehydratase small subunit  55.21 
 
 
163 aa  189  2e-47  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.845363 
 
 
-
 
NC_009635  Maeo_0347  3-isopropylmalate dehydratase, small subunit  52.17 
 
 
168 aa  188  2.9999999999999997e-47  Methanococcus aeolicus Nankai-3  Archaea  normal  0.135127  n/a   
 
 
-
 
NC_010483  TRQ2_0382  3-isopropylmalate dehydratase small subunit  55.83 
 
 
164 aa  186  2e-46  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0441  3-isopropylmalate dehydratase, small subunit  53.66 
 
 
165 aa  185  3e-46  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.969002  n/a   
 
 
-
 
NC_009486  Tpet_0365  3-isopropylmalate dehydratase small subunit  55.21 
 
 
166 aa  184  5e-46  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0507  3-isopropylmalate dehydratase small subunit  52.76 
 
 
165 aa  183  7e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1465  3-isopropylmalate dehydratase, small subunit  55 
 
 
168 aa  181  3e-45  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00596899  n/a   
 
 
-
 
NC_007955  Mbur_1631  3-isopropylmalate dehydratase small subunit  51.55 
 
 
160 aa  181  5.0000000000000004e-45  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00197454  n/a   
 
 
-
 
NC_009073  Pcal_1603  3-isopropylmalate dehydratase small subunit  52.8 
 
 
161 aa  178  2.9999999999999997e-44  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_013173  Dbac_1741  3-isopropylmalate dehydratase small subunit  54.6 
 
 
164 aa  178  4e-44  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_0831  3-isopropylmalate dehydratase small subunit  52.83 
 
 
162 aa  176  2e-43  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009486  Tpet_0620  3-isopropylmalate dehydratase small subunit  49.38 
 
 
166 aa  172  9.999999999999999e-43  Thermotoga petrophila RKU-1  Bacteria  normal  0.0153606  n/a   
 
 
-
 
NC_012029  Hlac_1103  3-isopropylmalate dehydratase, small subunit  50.31 
 
 
175 aa  172  9.999999999999999e-43  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_010483  TRQ2_0645  3-isopropylmalate dehydratase small subunit  49.38 
 
 
166 aa  172  9.999999999999999e-43  Thermotoga sp. RQ2  Bacteria  normal  0.014767  n/a   
 
 
-
 
NC_008701  Pisl_1813  3-isopropylmalate dehydratase small subunit  50.31 
 
 
161 aa  170  9e-42  Pyrobaculum islandicum DSM 4184  Archaea  normal  hitchhiker  0.00000193523 
 
 
-
 
NC_008553  Mthe_0853  3-isopropylmalate dehydratase, small subunit  51.57 
 
 
161 aa  169  2e-41  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_0186  3-isopropylmalate dehydratase, small subunit  55.26 
 
 
165 aa  167  8e-41  Methanosphaerula palustris E1-9c  Archaea  normal  0.388139  normal  0.0344382 
 
 
-
 
NC_010644  Emin_0403  3-isopropylmalate dehydratase small subunit  49.69 
 
 
164 aa  164  5e-40  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.583067 
 
 
-
 
NC_008942  Mlab_0608  3-isopropylmalate dehydratase, small subunit  51.61 
 
 
158 aa  162  2.0000000000000002e-39  Methanocorpusculum labreanum Z  Archaea  normal  0.864497  normal  0.293783 
 
 
-
 
NC_009376  Pars_2062  3-isopropylmalate dehydratase small subunit  48.12 
 
 
160 aa  160  5.0000000000000005e-39  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.127412 
 
 
-
 
NC_009712  Mboo_2076  3-isopropylmalate dehydratase, small subunit  48.39 
 
 
165 aa  159  2e-38  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.894184  normal 
 
 
-
 
NC_010424  Daud_1037  3-isopropylmalate dehydratase, small subunit  52.8 
 
 
166 aa  159  2e-38  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1578  3-isopropylmalate dehydratase, small subunit  49.36 
 
 
163 aa  159  2e-38  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0376678  n/a   
 
 
-
 
NC_009051  Memar_1948  3-isopropylmalate dehydratase, small subunit  50.32 
 
 
163 aa  159  2e-38  Methanoculleus marisnigri JR1  Archaea  normal  0.353439  n/a   
 
 
-
 
NC_007355  Mbar_A0244  3-isopropylmalate dehydratase, small subunit  47.2 
 
 
165 aa  158  3e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A2270  3-isopropylmalate dehydratase  47.83 
 
 
163 aa  158  3e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.310524  normal  0.0869974 
 
 
-
 
NC_009634  Mevan_1368  3-isopropylmalate dehydratase, small subunit  51.53 
 
 
161 aa  157  8e-38  Methanococcus vannielii SB  Archaea  normal  0.205096  n/a   
 
 
-
 
NC_010003  Pmob_1705  3-isopropylmalate dehydratase, small subunit  49.07 
 
 
167 aa  156  1e-37  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0377  3-isopropylmalate dehydratase, small subunit family protein  49.69 
 
 
166 aa  156  2e-37  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1621  3-isopropylmalate dehydratase, small subunit  45.06 
 
 
166 aa  155  2e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1631  3-isopropylmalate dehydratase, small subunit  50.31 
 
 
166 aa  155  2e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0426  3-isopropylmalate dehydratase small subunit  52.5 
 
 
167 aa  155  3e-37  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2763  3-isopropylmalate dehydratase, small subunit  47.4 
 
 
159 aa  154  4e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.445719  n/a   
 
 
-
 
NC_007796  Mhun_2362  3-isopropylmalate dehydratase, small subunit  49.35 
 
 
162 aa  154  5.0000000000000005e-37  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.478432 
 
 
-
 
NC_013385  Adeg_1101  3-isopropylmalate dehydratase, small subunit  49.69 
 
 
166 aa  153  8e-37  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0128  3-isopropylmalate dehydratase, small subunit  46.25 
 
 
163 aa  153  9e-37  Aciduliprofundum boonei T469  Archaea  normal  0.225854  n/a   
 
 
-
 
NC_009767  Rcas_3517  3-isopropylmalate dehydratase, small subunit  46.2 
 
 
170 aa  151  2.9999999999999998e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2337  3-isopropylmalate dehydratase, small subunit  49.07 
 
 
166 aa  152  2.9999999999999998e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1032  3-isopropylmalate dehydratase small subunit  50.67 
 
 
174 aa  152  2.9999999999999998e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.118082  hitchhiker  0.00124766 
 
 
-
 
NC_002936  DET0449  3-isopropylmalate dehydratase small subunit  50.62 
 
 
167 aa  151  4e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  0.844567  n/a   
 
 
-
 
NC_013552  DhcVS_391  aconitase/homoaconitase C-terminal domain protein, 3-isopropylmalate dehydratase small subunit  50.62 
 
 
167 aa  150  5e-36  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0274  3-isopropylmalate dehydratase, small subunit  46.25 
 
 
165 aa  150  8.999999999999999e-36  Sulfolobus solfataricus 98/2  Archaea  normal  0.449089  n/a   
 
 
-
 
NC_009635  Maeo_0652  3-isopropylmalate dehydratase, small subunit  46.06 
 
 
165 aa  147  5e-35  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_0829  3-isopropylmalate dehydratase small subunit  45.62 
 
 
161 aa  147  7e-35  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_013522  Taci_1367  3-isopropylmalate dehydratase, small subunit  45.4 
 
 
164 aa  146  1.0000000000000001e-34  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_1173  3-isopropylmalate dehydratase small subunit  44.03 
 
 
175 aa  144  7.0000000000000006e-34  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.595401 
 
 
-
 
NC_007348  Reut_B5386  3-isopropylmalate dehydratase, small subunit  42.86 
 
 
168 aa  142  1e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1379  3-isopropylmalate dehydratase, small subunit  44.44 
 
 
161 aa  143  1e-33  Methanococcus maripaludis C7  Archaea  normal  normal  0.132083 
 
 
-
 
NC_013522  Taci_1365  3-isopropylmalate dehydratase, small subunit  44.58 
 
 
172 aa  142  2e-33  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1257  3-isopropylmalate dehydratase, small subunit  43.83 
 
 
161 aa  140  6e-33  Methanococcus maripaludis C5  Archaea  normal  0.147077  n/a   
 
 
-
 
NC_010085  Nmar_0421  3-isopropylmalate dehydratase small subunit  43.67 
 
 
160 aa  139  1.9999999999999998e-32  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0517519 
 
 
-
 
NC_009523  RoseRS_1056  homoaconitate hydratase small subunit  41.77 
 
 
166 aa  136  1e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.23213  normal 
 
 
-
 
NC_009975  MmarC6_0529  3-isopropylmalate dehydratase, small subunit  42.59 
 
 
161 aa  135  2e-31  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007974  Rmet_5867  3-isopropylmalate dehydratase, small subunit  44.38 
 
 
170 aa  131  3.9999999999999996e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3472  homoaconitate hydratase small subunit  39.87 
 
 
166 aa  131  5e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0185812 
 
 
-
 
NC_009051  Memar_0635  3-isopropylmalate dehydratase, small subunit  44.38 
 
 
156 aa  129  2.0000000000000002e-29  Methanoculleus marisnigri JR1  Archaea  normal  0.100869  n/a   
 
 
-
 
NC_014212  Mesil_0441  3-isopropylmalate dehydratase, small subunit  40.51 
 
 
166 aa  129  2.0000000000000002e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  hitchhiker  0.00422672 
 
 
-
 
NC_013946  Mrub_2727  3-isopropylmalate dehydratase small subunit  38.85 
 
 
167 aa  127  7.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3601  3-isopropylmalate dehydratase small subunit  40.13 
 
 
166 aa  127  8.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.162666 
 
 
-
 
NC_010718  Nther_2158  3-isopropylmalate dehydratase, small subunit  39.62 
 
 
185 aa  127  9.000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.350414 
 
 
-
 
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