17 homologs were found in PanDaTox collection
for query gene Sfri_2544 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_2544  hypothetical protein  100 
 
 
246 aa  512  1e-144  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.438759  n/a   
 
 
-
 
NC_008709  Ping_3410  hypothetical protein  32.39 
 
 
259 aa  114  2.0000000000000002e-24  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1348  hypothetical protein  28.7 
 
 
258 aa  96.3  4e-19  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00722512  decreased coverage  0.000000397841 
 
 
-
 
NC_011663  Sbal223_0687  hypothetical protein  27.95 
 
 
242 aa  89  7e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3690  hypothetical protein  26.64 
 
 
242 aa  87.8  1e-16  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0666  hypothetical protein  27.56 
 
 
242 aa  86.7  3e-16  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1248  hypothetical protein  27.44 
 
 
258 aa  86.7  4e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0534452  normal  0.591424 
 
 
-
 
NC_009997  Sbal195_0697  hypothetical protein  27.56 
 
 
242 aa  86.3  4e-16  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1143  hypothetical protein  29.75 
 
 
295 aa  84.3  0.000000000000001  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000972481  n/a   
 
 
-
 
NC_008322  Shewmr7_0585  hypothetical protein  27.98 
 
 
248 aa  77.4  0.0000000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1156  hypothetical protein  27.08 
 
 
277 aa  77.8  0.0000000000002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000585757  decreased coverage  0.00659921 
 
 
-
 
NC_008577  Shewana3_3538  hypothetical protein  62.5 
 
 
248 aa  72.8  0.000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3368  hypothetical protein  62.5 
 
 
248 aa  72.4  0.000000000006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0766.1  hypothetical protein  61.22 
 
 
189 aa  71.2  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3934  hypothetical protein  28.76 
 
 
250 aa  71.2  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3228  hypothetical protein  24.32 
 
 
240 aa  43.5  0.003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_33810  hypothetical protein  24.82 
 
 
266 aa  42.4  0.006  Azotobacter vinelandii DJ  Bacteria  normal  0.0167034  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>