More than 300 homologs were found in PanDaTox collection
for query gene Sfri_2115 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  54.13 
 
 
589 aa  642    Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  53.45 
 
 
591 aa  637    Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_009831  Ssed_2292  acyl-CoA dehydrogenase domain-containing protein  74.53 
 
 
585 aa  942    Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.00000293034  hitchhiker  0.0000000044095 
 
 
-
 
NC_004347  SO_2395  acyl-CoA dehydrogenase family protein  75.73 
 
 
585 aa  942    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1961  acyl-CoA dehydrogenase domain-containing protein  73.85 
 
 
583 aa  919    Shewanella loihica PV-4  Bacteria  unclonable  0.00000164987  hitchhiker  0.00189084 
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  54.3 
 
 
589 aa  641    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2077  acyl-CoA dehydrogenase domain-containing protein  75.04 
 
 
585 aa  943    Shewanella baltica OS155  Bacteria  unclonable  0.0000000861325  n/a   
 
 
-
 
NC_008700  Sama_1743  acyl-CoA dehydrogenase family protein  65.76 
 
 
578 aa  768    Shewanella amazonensis SB2B  Bacteria  normal  0.0351392  hitchhiker  0.00338381 
 
 
-
 
NC_009665  Shew185_2272  acyl-CoA dehydrogenase domain-containing protein  75.04 
 
 
585 aa  944    Shewanella baltica OS185  Bacteria  decreased coverage  0.00000131801  n/a   
 
 
-
 
NC_011663  Sbal223_2073  acyl-CoA dehydrogenase domain protein  74.87 
 
 
585 aa  942    Shewanella baltica OS223  Bacteria  decreased coverage  0.0000286004  hitchhiker  0.00000000164585 
 
 
-
 
NC_007954  Sden_1761  acyl-CoA dehydrogenase-like protein  73.85 
 
 
583 aa  909    Shewanella denitrificans OS217  Bacteria  normal  0.170818  n/a   
 
 
-
 
NC_009438  Sputcn32_2035  acyl-CoA dehydrogenase domain-containing protein  74.7 
 
 
585 aa  937    Shewanella putrefaciens CN-32  Bacteria  normal  0.0140722  n/a   
 
 
-
 
NC_008577  Shewana3_1984  acyl-CoA dehydrogenase domain-containing protein  75.9 
 
 
585 aa  948    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000742093  hitchhiker  0.00000000303591 
 
 
-
 
NC_009997  Sbal195_2389  acyl-CoA dehydrogenase domain-containing protein  75.04 
 
 
585 aa  946    Shewanella baltica OS195  Bacteria  hitchhiker  0.0000323201  unclonable  0.0000144504 
 
 
-
 
NC_010506  Swoo_2323  acyl-CoA dehydrogenase domain-containing protein  73.68 
 
 
585 aa  932    Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.00000258796  normal  0.0587246 
 
 
-
 
NC_008321  Shewmr4_1931  acyl-CoA dehydrogenase domain-containing protein  76.07 
 
 
585 aa  945    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00101819  hitchhiker  0.00000000203538 
 
 
-
 
NC_008322  Shewmr7_2047  acyl-CoA dehydrogenase domain-containing protein  76.24 
 
 
585 aa  944    Shewanella sp. MR-7  Bacteria  unclonable  0.0000359523  hitchhiker  0.00243914 
 
 
-
 
NC_009901  Spea_2081  acyl-CoA dehydrogenase domain-containing protein  71.5 
 
 
586 aa  899    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2115  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
585 aa  1213    Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000000107546  n/a   
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  54.13 
 
 
594 aa  640    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  54.53 
 
 
593 aa  632  1e-180  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  53.03 
 
 
590 aa  634  1e-180  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  53.21 
 
 
592 aa  627  1e-178  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  53.04 
 
 
592 aa  626  1e-178  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_009656  PSPA7_0899  putative acyl-CoA dehydrogenase  53.79 
 
 
593 aa  622  1e-177  Pseudomonas aeruginosa PA7  Bacteria  normal  0.183433  n/a   
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  53.04 
 
 
592 aa  624  1e-177  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  53.76 
 
 
592 aa  622  1e-177  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  52.7 
 
 
592 aa  619  1e-176  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  52.7 
 
 
592 aa  617  1e-175  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  52.03 
 
 
592 aa  609  1e-173  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  53.03 
 
 
596 aa  609  1e-173  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.86 
 
 
592 aa  605  9.999999999999999e-173  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  51.69 
 
 
592 aa  605  9.999999999999999e-173  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  51.35 
 
 
592 aa  596  1e-169  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  52.2 
 
 
592 aa  594  1e-168  Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  50.93 
 
 
589 aa  590  1e-167  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  51.1 
 
 
592 aa  587  1e-166  Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_007204  Psyc_0964  putative acyl-CoA dehydrogenase  51.37 
 
 
594 aa  580  1e-164  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.295286 
 
 
-
 
NC_007969  Pcryo_1453  acyl-CoA dehydrogenase-like  51.78 
 
 
594 aa  579  1e-164  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0911  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
594 aa  571  1e-161  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4476  acyl-CoA dehydrogenase family protein  48.84 
 
 
602 aa  567  1e-160  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  47.5 
 
 
594 aa  546  1e-154  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  47.93 
 
 
598 aa  534  1e-150  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  46.17 
 
 
594 aa  528  1e-148  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_010581  Bind_3270  acyl-CoA dehydrogenase domain-containing protein  47.25 
 
 
589 aa  522  1e-147  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.928041  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  45.83 
 
 
595 aa  520  1e-146  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  46.33 
 
 
597 aa  519  1e-146  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  46.93 
 
 
598 aa  518  1.0000000000000001e-145  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  47.1 
 
 
598 aa  517  1.0000000000000001e-145  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  43.52 
 
 
596 aa  513  1e-144  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  45.26 
 
 
595 aa  510  1e-143  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  45.67 
 
 
596 aa  511  1e-143  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  45.47 
 
 
595 aa  508  9.999999999999999e-143  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  45.27 
 
 
595 aa  508  9.999999999999999e-143  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  44.89 
 
 
595 aa  502  1e-141  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  45.23 
 
 
595 aa  505  1e-141  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  45.23 
 
 
595 aa  505  1e-141  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  44.33 
 
 
595 aa  504  1e-141  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  44.89 
 
 
595 aa  502  1e-141  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  45.23 
 
 
595 aa  503  1e-141  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  44.89 
 
 
595 aa  502  1e-141  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  45.23 
 
 
595 aa  505  1e-141  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  44.78 
 
 
599 aa  503  1e-141  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  44.65 
 
 
596 aa  502  1e-141  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  45.23 
 
 
595 aa  505  1e-141  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  44.72 
 
 
595 aa  502  1e-141  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  44.65 
 
 
601 aa  504  1e-141  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  45.01 
 
 
596 aa  505  1e-141  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  45.48 
 
 
596 aa  504  1e-141  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  44.78 
 
 
595 aa  503  1e-141  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  45.44 
 
 
595 aa  504  1e-141  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  44.78 
 
 
595 aa  503  1e-141  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  44.78 
 
 
595 aa  503  1e-141  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_011894  Mnod_5238  acyl-CoA dehydrogenase domain protein  45.67 
 
 
597 aa  502  1e-141  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  44.28 
 
 
595 aa  499  1e-140  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  44.87 
 
 
595 aa  501  1e-140  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.53 
 
 
595 aa  499  1e-140  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  45.11 
 
 
596 aa  501  1e-140  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_010335  Caul_5262  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
590 aa  501  1e-140  Caulobacter sp. K31  Bacteria  normal  0.935706  hitchhiker  0.000268053 
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  43.95 
 
 
597 aa  500  1e-140  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  43.52 
 
 
601 aa  496  1e-139  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  45.27 
 
 
595 aa  497  1e-139  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  43.98 
 
 
596 aa  496  1e-139  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  43.38 
 
 
601 aa  496  1e-139  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3224  acyl-CoA dehydrogenase domain-containing protein  46.27 
 
 
584 aa  497  1e-139  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  44.28 
 
 
597 aa  496  1e-139  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  44.5 
 
 
596 aa  497  1e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  43.52 
 
 
601 aa  496  1e-139  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  43.85 
 
 
599 aa  492  9.999999999999999e-139  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  44.31 
 
 
592 aa  494  9.999999999999999e-139  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  43.91 
 
 
603 aa  495  9.999999999999999e-139  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1452  acyl-CoA dehydrogenase-like  44.43 
 
 
597 aa  493  9.999999999999999e-139  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  43.19 
 
 
601 aa  493  9.999999999999999e-139  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  44.44 
 
 
593 aa  494  9.999999999999999e-139  Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  43.12 
 
 
597 aa  491  1e-137  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  43.12 
 
 
597 aa  491  1e-137  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3693  acyl-CoA dehydrogenase domain-containing protein  44.82 
 
 
591 aa  489  1e-137  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2970  acyl-CoA dehydrogenase-like  44.79 
 
 
591 aa  490  1e-137  Jannaschia sp. CCS1  Bacteria  normal  0.108103  normal  0.100369 
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  43.02 
 
 
601 aa  490  1e-137  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_009720  Xaut_0623  acyl-CoA dehydrogenase domain-containing protein  47.22 
 
 
585 aa  489  1e-137  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
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