15 homologs were found in PanDaTox collection
for query gene SeHA_C2059 on replicon NC_011083
Organism: Salmonella enterica subsp. enterica serovar Heidelberg str. SL476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A1996  guanine nucleotide exchange factor SopE  100 
 
 		 240 aa  498  1e-140  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  decreased coverage  0.000141874 
 
 
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NC_011083  SeHA_C2059  guanine nucleotide exchange factor SopE  100 
 
 		 240 aa  498  1e-140  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.940351  normal  1 
 
 
-
 
NC_011205  SeD_A1457  guanine nucleotide exchange factor SopE  100 
 
 		 240 aa  498  1e-140  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.474266 
 
 
-
 
NC_011094  SeSA_A1999  guanine nucleotide exchange factor SopE  95.83 
 
 		 192 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.595643 
 
 
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NC_011094  SeSA_A4485  guanine nucleotide exchange factor SopE  69.75 
 
 		 240 aa  350  1e-95  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00777201 
 
 
-
 
NC_011083  SeHA_C1163  guanine nucleotide exchange factor SopE  69.2 
 
 		 240 aa  345  5e-94  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal  1 
 
 
-
 
NC_011205  SeD_A1429  guanine nucleotide exchange factor SopE  66.81 
 
 		 240 aa  331  6e-90  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.148881 
 
 
-
 
NC_011149  SeAg_B1274  guanine nucleotide exchange factor SopE  98.05 
 
 		 154 aa  316  2e-85  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0196961  n/a   
 
 
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NC_007650  BTH_II0848  type III secretion target BopE  28.78 
 
 		 261 aa  67.8  0.0000000001  Burkholderia thailandensis E264  Bacteria  normal  0.309877  n/a   
 
 
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NC_006349  BMAA1523  type III secretion target BopE  28.78 
 
 		 261 aa  67  0.0000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0599952  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0564  type III secretion target BopE  43.06 
 
 		 261 aa  67  0.0000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.113735  n/a   
 
 
-
 
NC_008835  BMA10229_2080  type III secretion target BopE  28.78 
 
 		 261 aa  67  0.0000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.82484  n/a   
 
 
-
 
NC_009075  BURPS668_A2155  type III secretion target BopE  43.06 
 
 		 261 aa  67  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
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NC_009078  BURPS1106A_A2067  putative guanine nucleotide exchange factor sopE  28.78 
 
 		 261 aa  67  0.0000000002  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00850265  n/a   
 
 
-
 
NC_009079  BMA10247_A0761  type III secretion target BopE  28.78 
 
 		 261 aa  67  0.0000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
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