5 homologs were found in PanDaTox collection
for query gene SeD_B0070 on replicon NC_011204
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011204  SeD_B0070  replication protein  100 
 
 
81 aa  163  5.9999999999999996e-40  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.856785  normal 
 
 
-
 
NC_010157  YpAngola_B0080  replication protein  70 
 
 
84 aa  115  1.9999999999999998e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011350  ECH74115_B0087  replication protein  57.32 
 
 
84 aa  93.6  8e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.060246  normal 
 
 
-
 
NC_010488  EcSMS35_A0003  replication protein  48.1 
 
 
86 aa  79  0.00000000000002  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0001842  normal 
 
 
-
 
NC_010660  SbBS512_A0281  replication protein  46.84 
 
 
86 aa  78.2  0.00000000000003  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000340957  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>