5 homologs were found in PanDaTox collection
for query gene SeD_A0620 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011205  SeD_A0620  hypothetical protein  100 
 
 
307 aa  639    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  decreased coverage  0.00146691 
 
 
-
 
NC_008686  Pden_2054  hypothetical protein  43.19 
 
 
307 aa  255  8e-67  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00000013578  unclonable  0.0000242077 
 
 
-
 
NC_007964  Nham_2360  hypothetical protein  43.96 
 
 
314 aa  253  2.0000000000000002e-66  Nitrobacter hamburgensis X14  Bacteria  unclonable  0.0000000129808  n/a   
 
 
-
 
NC_011004  Rpal_4097  hypothetical protein  42.66 
 
 
309 aa  245  6.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000213061  n/a   
 
 
-
 
NC_007954  Sden_0681  KilA-like protein  25.95 
 
 
249 aa  50.8  0.00003  Shewanella denitrificans OS217  Bacteria  normal  0.943072  n/a   
 
 
-
 
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