15 homologs were found in PanDaTox collection
for query gene Sden_3272 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3272  hypothetical protein  100 
 
 
110 aa  229  1e-59  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000000000214556  n/a   
 
 
-
 
NC_009665  Shew185_3376  hypothetical protein  54.55 
 
 
120 aa  121  4e-27  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000000000285336  n/a   
 
 
-
 
NC_009665  Shew185_3263  hypothetical protein  53.64 
 
 
120 aa  119  9.999999999999999e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0760  hypothetical protein  53.15 
 
 
117 aa  119  9.999999999999999e-27  Shewanella baltica OS223  Bacteria  decreased coverage  0.000000216456  normal  0.0644633 
 
 
-
 
NC_009665  Shew185_1852  hypothetical protein  49.15 
 
 
120 aa  118  1.9999999999999998e-26  Shewanella baltica OS185  Bacteria  decreased coverage  0.000559481  n/a   
 
 
-
 
NC_009997  Sbal195_0764  hypothetical protein  53.15 
 
 
117 aa  119  1.9999999999999998e-26  Shewanella baltica OS195  Bacteria  unclonable  0.0000000592368  unclonable  0.0000111786 
 
 
-
 
NC_009052  Sbal_3619  hypothetical protein  52.25 
 
 
117 aa  117  6e-26  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000750171  n/a   
 
 
-
 
NC_009997  Sbal195_2012  hypothetical protein  52.25 
 
 
117 aa  117  7e-26  Shewanella baltica OS195  Bacteria  unclonable  0.0000000354082  normal 
 
 
-
 
NC_009997  Sbal195_3498  hypothetical protein  49.15 
 
 
120 aa  117  7e-26  Shewanella baltica OS195  Bacteria  unclonable  0.0000000286296  unclonable  0.0000103945 
 
 
-
 
NC_009665  Shew185_0735  hypothetical protein  52.25 
 
 
117 aa  115  1.9999999999999998e-25  Shewanella baltica OS185  Bacteria  normal  0.0163007  n/a   
 
 
-
 
NC_009997  Sbal195_1969  hypothetical protein  51.82 
 
 
120 aa  115  3e-25  Shewanella baltica OS195  Bacteria  hitchhiker  0.00469043  normal  0.0443885 
 
 
-
 
NC_009665  Shew185_1962  hypothetical protein  50.91 
 
 
116 aa  114  5e-25  Shewanella baltica OS185  Bacteria  hitchhiker  0.000114871  n/a   
 
 
-
 
NC_009997  Sbal195_3400  hypothetical protein  47.46 
 
 
120 aa  112  1.0000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  0.797431  hitchhiker  0.000690815 
 
 
-
 
NC_009665  Shew185_2568  hypothetical protein  51.35 
 
 
120 aa  111  3e-24  Shewanella baltica OS185  Bacteria  decreased coverage  0.0000135841  n/a   
 
 
-
 
NC_008345  Sfri_1645  hypothetical protein  47.27 
 
 
107 aa  102  1e-21  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.0000102791  n/a   
 
 
-
 
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