17 homologs were found in PanDaTox collection
for query gene Sde_3143 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3143  hypothetical protein  100 
 
 
369 aa  773    Saccharophagus degradans 2-40  Bacteria  normal  0.387409  normal 
 
 
-
 
NC_011898  Ccel_2162  lipolytic protein G-D-S-L family  29.77 
 
 
436 aa  147  3e-34  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3337  acetylxylan esterase  26.72 
 
 
402 aa  114  4.0000000000000004e-24  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  decreased coverage  0.00939156 
 
 
-
 
NC_008254  Meso_0912  lipolytic enzyme, G-D-S-L  26.52 
 
 
366 aa  101  3e-20  Chelativorans sp. BNC1  Bacteria  normal  0.273013  n/a   
 
 
-
 
NC_009441  Fjoh_4965  GDSL family lipase  26.97 
 
 
366 aa  94.4  3e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.517608  n/a   
 
 
-
 
NC_008255  CHU_0721  hypothetical protein  31.17 
 
 
387 aa  89  1e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.706774  normal 
 
 
-
 
NC_009012  Cthe_0797  glycoside hydrolase family protein  22.41 
 
 
814 aa  86.7  6e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2370  electron transport complex, RnfABCDGE type, D subunit  22.44 
 
 
360 aa  81.6  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00713619  normal  0.973713 
 
 
-
 
NC_014151  Cfla_3169  cellulose-binding family II  25.23 
 
 
545 aa  76.3  0.0000000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.111807 
 
 
-
 
NC_008009  Acid345_1905  lipolytic enzyme, G-D-S-L  26.3 
 
 
366 aa  73.9  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0113749 
 
 
-
 
NC_010571  Oter_4327  GDSL family lipase  21.85 
 
 
366 aa  73.6  0.000000000005  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1254  GDSL family lipase  23.37 
 
 
357 aa  70.9  0.00000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000525756  n/a   
 
 
-
 
NC_013093  Amir_3495  cellulose-binding family II  27.03 
 
 
495 aa  64.7  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1140  GDSL family lipase  33.33 
 
 
385 aa  62.4  0.00000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00178726  n/a   
 
 
-
 
NC_008686  Pden_1295  lipase/acylhydrolase, putative  23.7 
 
 
390 aa  57.4  0.0000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.336383  normal 
 
 
-
 
NC_013093  Amir_4674  lipolytic protein G-D-S-L family  23.05 
 
 
334 aa  53.1  0.000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0615733  n/a   
 
 
-
 
NC_007912  Sde_2933  acetylxylan esterase  24.09 
 
 
208 aa  48.9  0.0001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00634363  normal  0.979732 
 
 
-
 
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