5 homologs were found in PanDaTox collection
for query gene Sde_0540 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_0540  alpha amylase domain-containing protein  100 
 
 
355 aa  734    Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000140563  normal 
 
 
-
 
NC_008228  Patl_3637  hypothetical protein  49.44 
 
 
352 aa  350  2e-95  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000448903  n/a   
 
 
-
 
NC_007484  Noc_1224  hypothetical protein  33.61 
 
 
873 aa  150  2e-35  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0517  hypothetical protein  29.03 
 
 
366 aa  144  2e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0241651 
 
 
-
 
NC_008228  Patl_1281  hypothetical protein  26.58 
 
 
355 aa  97.1  5e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
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