More than 300 homologs were found in PanDaTox collection
for query gene Sbal_2108 on replicon NC_009052
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_2108  response regulator receiver protein  100 
 
 
224 aa  462  1e-129  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2366  response regulator receiver protein  74 
 
 
577 aa  310  9e-84  Shewanella baltica OS195  Bacteria  normal  0.018295  normal 
 
 
-
 
NC_011663  Sbal223_2096  response regulator receiver protein  74 
 
 
577 aa  310  1e-83  Shewanella baltica OS223  Bacteria  normal  0.856197  normal 
 
 
-
 
NC_009665  Shew185_2249  response regulator receiver protein  73.5 
 
 
577 aa  307  8e-83  Shewanella baltica OS185  Bacteria  normal  0.299733  n/a   
 
 
-
 
NC_004347  SO_2119  response regulator  65 
 
 
565 aa  287  8e-77  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2095  response regulator receiver protein  61.34 
 
 
567 aa  253  2.0000000000000002e-66  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1879  response regulator receiver protein  61.34 
 
 
567 aa  253  2.0000000000000002e-66  Shewanella sp. MR-7  Bacteria  normal  normal  0.686257 
 
 
-
 
NC_008577  Shewana3_2220  response regulator receiver protein  59.28 
 
 
565 aa  240  1e-62  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2157  response regulator receiver protein  28.65 
 
 
577 aa  85.9  4e-16  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  31.25 
 
 
476 aa  82.4  0.000000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_013889  TK90_2268  two component, sigma54 specific, transcriptional regulator, Fis family  30.77 
 
 
459 aa  80.1  0.00000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00701331 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  29.73 
 
 
410 aa  79.7  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3297  response regulator receiver protein  25.79 
 
 
550 aa  79.3  0.00000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1419  signal transduction histidine kinase  26.34 
 
 
551 aa  79  0.00000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013061  Phep_3751  sigma-54 factor interaction domain-containing protein  33.33 
 
 
441 aa  78.6  0.00000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1417  two component Fis family transcriptional regulator  26.58 
 
 
492 aa  78.2  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1544  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27.96 
 
 
739 aa  77.8  0.0000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.498595 
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  33.12 
 
 
419 aa  77.8  0.0000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1483  response regulator receiver modulated diguanylate cyclase  30.57 
 
 
335 aa  77  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.882912  n/a   
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  28.28 
 
 
363 aa  76.6  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  32.26 
 
 
455 aa  76.3  0.0000000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_009656  PSPA7_3962  two-component response regulator PfeR  27.7 
 
 
240 aa  76.3  0.0000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0847  two component, sigma54 specific, Fis family transcriptional regulator  29.29 
 
 
460 aa  74.3  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.0166749  normal 
 
 
-
 
NC_007947  Mfla_0181  two component, sigma54 specific, Fis family transcriptional regulator  28.39 
 
 
423 aa  73.6  0.000000000002  Methylobacillus flagellatus KT  Bacteria  normal  decreased coverage  0.000041492 
 
 
-
 
NC_011769  DvMF_0064  histidine kinase  28.12 
 
 
598 aa  73.2  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  29.23 
 
 
463 aa  72.8  0.000000000004  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_013501  Rmar_0819  two component transcriptional regulator, winged helix family  25.78 
 
 
246 aa  72.4  0.000000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1482  two component, sigma54 specific, transcriptional regulator, Fis family  32.71 
 
 
458 aa  72.4  0.000000000006  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.712271  n/a   
 
 
-
 
NC_010803  Clim_0904  two component, sigma54 specific, transcriptional regulator, Fis family  26.95 
 
 
479 aa  72.4  0.000000000006  Chlorobium limicola DSM 245  Bacteria  normal  0.14803  n/a   
 
 
-
 
NC_003296  RS02226  sigma-54 interacting response regulator transcription regulator protein  26.09 
 
 
491 aa  72  0.000000000007  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1579  response regulator receiver  31.25 
 
 
225 aa  72  0.000000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.410227  n/a   
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  27.33 
 
 
412 aa  71.6  0.000000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_007651  BTH_I0135  DNA-binding response regulator  32.48 
 
 
228 aa  71.6  0.000000000009  Burkholderia thailandensis E264  Bacteria  normal  0.719023  n/a   
 
 
-
 
NC_011138  MADE_01717  putative response regulator  23.92 
 
 
568 aa  71.6  0.00000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4259  two component, sigma54 specific, Fis family transcriptional regulator  31.11 
 
 
504 aa  71.6  0.00000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0389  two component, sigma54 specific, Fis family transcriptional regulator  29.73 
 
 
432 aa  71.6  0.00000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3029  two component transcriptional regulator  23.83 
 
 
238 aa  71.2  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.452516  normal 
 
 
-
 
NC_010681  Bphyt_2893  two component, sigma54 specific, transcriptional regulator, Fis family  27.86 
 
 
460 aa  71.6  0.00000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.321505  normal  0.0587462 
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  30.3 
 
 
501 aa  70.5  0.00000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3878  two component, sigma54 specific, transcriptional regulator, Fis family  25.36 
 
 
468 aa  70.9  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  0.330744  normal 
 
 
-
 
NC_010678  Rpic_3767  two component, sigma54 specific, transcriptional regulator, Fis family  25.36 
 
 
468 aa  70.9  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.114638  normal  0.0523944 
 
 
-
 
NC_011901  Tgr7_0200  two component, sigma54 specific, transcriptional regulator, Fis family  30.15 
 
 
458 aa  70.1  0.00000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.162426  n/a   
 
 
-
 
NC_010681  Bphyt_1136  two component, sigma54 specific, transcriptional regulator, Fis family  28.99 
 
 
466 aa  70.1  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1140  two component, sigma54 specific, Fis family transcriptional regulator  27.78 
 
 
461 aa  70.1  0.00000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0516  two component Fis family transcriptional regulator  32.48 
 
 
223 aa  70.1  0.00000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0663038 
 
 
-
 
NC_009076  BURPS1106A_0168  Fis family DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.75283  n/a   
 
 
-
 
NC_006348  BMA0149  DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0760476  n/a   
 
 
-
 
NC_009074  BURPS668_0158  Fis family DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia pseudomallei 668  Bacteria  normal  0.135474  n/a   
 
 
-
 
NC_007347  Reut_A3402  helix-turn-helix, Fis-type  31.62 
 
 
236 aa  69.7  0.00000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.0473986  n/a   
 
 
-
 
NC_007434  BURPS1710b_0353  DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.450752  n/a   
 
 
-
 
NC_007510  Bcep18194_A4252  two component, sigma54 specific, Fis family transcriptional regulator  27.78 
 
 
461 aa  70.1  0.00000000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2798  DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2360  DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.405701  n/a   
 
 
-
 
NC_010508  Bcenmc03_1098  two component, sigma54 specific, Fis family transcriptional regulator  27.78 
 
 
461 aa  70.1  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2164  two component, sigma54 specific, Fis family transcriptional regulator  27.78 
 
 
461 aa  70.1  0.00000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.340092 
 
 
-
 
NC_007951  Bxe_A3376  two component, sigma-54 specific, Fis family transcriptional regulator  28.99 
 
 
466 aa  70.1  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.418945 
 
 
-
 
NC_008060  Bcen_0660  two component, sigma54 specific, Fis family transcriptional regulator  27.78 
 
 
461 aa  70.1  0.00000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2282  DNA-binding response regulator  32.48 
 
 
227 aa  70.1  0.00000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0153588  n/a   
 
 
-
 
NC_008390  Bamb_1016  two component, sigma54 specific, Fis family transcriptional regulator  27.86 
 
 
461 aa  70.1  0.00000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.29025  n/a   
 
 
-
 
NC_003295  RSc0078  two component response regulator transcription regulator protein  31.93 
 
 
239 aa  69.3  0.00000000004  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00000511995  normal 
 
 
-
 
NC_009483  Gura_0925  two component, sigma-54 specific, Fis family transcriptional regulator  28.68 
 
 
500 aa  69.3  0.00000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  28.8 
 
 
461 aa  69.7  0.00000000004  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3465  putative PAS/PAC sensor protein  26.12 
 
 
489 aa  69.3  0.00000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3671  two component transcriptional regulator, Fis family  31.93 
 
 
236 aa  69.7  0.00000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1091  two component, sigma-54 specific, Fis family transcriptional regulator  27.14 
 
 
460 aa  69.7  0.00000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3348  two component transcriptional regulator, Fis family  31.93 
 
 
237 aa  69.3  0.00000000005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  30.33 
 
 
461 aa  68.9  0.00000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011761  AFE_0024  nitrogen assimilation regulatory protein NtrX, putative  27.13 
 
 
468 aa  68.9  0.00000000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0025  two component, sigma54 specific, transcriptional regulator, Fis family  27.13 
 
 
468 aa  68.9  0.00000000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0807039 
 
 
-
 
NC_007973  Rmet_3559  response regulator receiver domain-containing protein  30.77 
 
 
238 aa  68.6  0.00000000007  Cupriavidus metallidurans CH34  Bacteria  normal  0.0874597  normal 
 
 
-
 
NC_009439  Pmen_2819  response regulator receiver protein  23.44 
 
 
562 aa  68.6  0.00000000007  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0360472 
 
 
-
 
NC_009076  BURPS1106A_2834  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2773  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1929  response regulator receiver protein  27.27 
 
 
394 aa  68.6  0.00000000008  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.310245 
 
 
-
 
NC_004578  PSPTO_1964  response regulator  25.57 
 
 
568 aa  68.6  0.00000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.58831  n/a   
 
 
-
 
NC_006348  BMA0549  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1783  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia mallei NCTC 10247  Bacteria  normal  0.231821  n/a   
 
 
-
 
NC_011726  PCC8801_1495  response regulator receiver sensor signal transduction histidine kinase  27.78 
 
 
389 aa  68.6  0.00000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007434  BURPS1710b_2887  sigma-54 interacting response regulator protein  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2821  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia mallei NCTC 10229  Bacteria  normal  0.428472  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2460  sigma-54 dependent DNA-binding response regulator  27.14 
 
 
465 aa  68.6  0.00000000008  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1522  response regulator receiver sensor signal transduction histidine kinase  27.78 
 
 
389 aa  68.6  0.00000000008  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1020  two component, sigma54 specific, Fis family transcriptional regulator  27.86 
 
 
461 aa  68.6  0.00000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3309  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.15 
 
 
900 aa  67.8  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269875  normal  0.342346 
 
 
-
 
NC_004311  BRA0082  sigma-54 dependent DNA-binding response regulator  28.91 
 
 
496 aa  67.8  0.0000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1430  multi-sensor signal transduction histidine kinase  25.56 
 
 
737 aa  67.8  0.0000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.224344 
 
 
-
 
NC_007519  Dde_1522  histidine kinase  26.88 
 
 
544 aa  67.8  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2355  two component Fis family transcriptional regulator  24.6 
 
 
465 aa  67.8  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.658958  n/a   
 
 
-
 
NC_007651  BTH_I1736  sigma-54 dependent DNA-binding response regulator  27.54 
 
 
465 aa  68.2  0.0000000001  Burkholderia thailandensis E264  Bacteria  normal  0.234092  n/a   
 
 
-
 
NC_013132  Cpin_2586  two component transcriptional regulator, winged helix family  29.17 
 
 
227 aa  67.8  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0130561 
 
 
-
 
NC_007912  Sde_1112  response regulator receiver domain-containing protein  33.08 
 
 
399 aa  68.2  0.0000000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1183  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27.45 
 
 
722 aa  68.2  0.0000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2956  response regulator receiver protein  24.23 
 
 
365 aa  68.2  0.0000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  25.76 
 
 
393 aa  67.8  0.0000000001  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  25.76 
 
 
412 aa  67.8  0.0000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1594  response regulator receiver protein  25.68 
 
 
548 aa  68.2  0.0000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1648  response regulator receiver protein  25.17 
 
 
367 aa  67.8  0.0000000001  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.0057956  normal 
 
 
-
 
NC_007404  Tbd_0085  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  29.77 
 
 
738 aa  67.4  0.0000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.127866 
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  25.16 
 
 
357 aa  67  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_008639  Cpha266_1834  multi-sensor signal transduction histidine kinase  25.56 
 
 
681 aa  67.4  0.0000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
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