More than 300 homologs were found in PanDaTox collection
for query gene Sbal_1762 on replicon NC_009052
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_1799  histone family protein DNA-binding protein  100 
 
 
91 aa  186  1e-46  Shewanella baltica OS195  Bacteria  normal  0.124697  normal  0.675776 
 
 
-
 
NC_009665  Shew185_1755  histone family protein DNA-binding protein  100 
 
 
91 aa  186  1e-46  Shewanella baltica OS185  Bacteria  normal  0.217533  n/a   
 
 
-
 
NC_009052  Sbal_1762  histone family protein DNA-binding protein  100 
 
 
91 aa  186  1e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2523  histone family protein DNA-binding protein  100 
 
 
91 aa  184  5e-46  Shewanella baltica OS223  Bacteria  normal  0.244531  normal  0.459813 
 
 
-
 
NC_008321  Shewmr4_1550  histone family protein DNA-binding protein  84.44 
 
 
91 aa  159  1e-38  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000495364  normal 
 
 
-
 
NC_004347  SO_1863  HU family DNA-binding protein  84.44 
 
 
91 aa  158  3e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_1615  histone family protein DNA-binding protein  82.22 
 
 
91 aa  157  5e-38  Shewanella sp. ANA-3  Bacteria  normal  0.193087  normal  0.430163 
 
 
-
 
NC_008322  Shewmr7_1620  histone family protein DNA-binding protein  82.22 
 
 
91 aa  156  1e-37  Shewanella sp. MR-7  Bacteria  normal  0.628281  normal  0.306409 
 
 
-
 
NC_008345  Sfri_1439  histone family protein DNA-binding protein  63.33 
 
 
91 aa  120  9e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1611  HU family DNA-binding protein  57.3 
 
 
91 aa  102  2e-21  Shewanella amazonensis SB2B  Bacteria  normal  0.0329603  normal 
 
 
-
 
NC_008228  Patl_3133  histone-like DNA-binding protein  46.67 
 
 
90 aa  88.2  3e-17  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.0000000045924  n/a   
 
 
-
 
NC_009380  Strop_4159  histone family protein DNA-binding protein  40.66 
 
 
91 aa  87.8  4e-17  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  44.44 
 
 
90 aa  85.1  3e-16  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_007954  Sden_1500  histone-like DNA-binding protein  52.22 
 
 
94 aa  85.1  3e-16  Shewanella denitrificans OS217  Bacteria  normal  0.909025  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  44.44 
 
 
90 aa  85.1  3e-16  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.7  4e-16  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  43.33 
 
 
90 aa  84.7  4e-16  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  42.22 
 
 
90 aa  84.7  4e-16  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  84.7  4e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  84.7  4e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  43.33 
 
 
90 aa  84.7  4e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  84.7  4e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3110  histone family protein DNA-binding protein  43.33 
 
 
90 aa  84.3  5e-16  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000105676  hitchhiker  0.00000299463 
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  43.82 
 
 
96 aa  84.3  5e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal 
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  43.33 
 
 
91 aa  84  6e-16  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  44.44 
 
 
90 aa  84.3  6e-16  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
CP001509  ECD_00392  HU, DNA-binding transcriptional regulator, beta subunit  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3169  histone family protein DNA-binding protein  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli DH1  Bacteria  hitchhiker  0.000005828  n/a   
 
 
-
 
NC_011080  SNSL254_A0500  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.332585  normal  0.0268714 
 
 
-
 
NC_010658  SbBS512_E0363  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00017145  n/a   
 
 
-
 
NC_011205  SeD_A0493  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.107938  normal 
 
 
-
 
NC_011353  ECH74115_0526  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00026983  normal  0.698185 
 
 
-
 
NC_010468  EcolC_3192  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.0216859  hitchhiker  0.00242013 
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal 
 
 
-
 
NC_011312  VSAL_I2846  DNA-binding protein HU-alpha  44.44 
 
 
90 aa  82.8  0.000000000000001  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00368421  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_011094  SeSA_A0510  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0507646  normal 
 
 
-
 
NC_011083  SeHA_C0554  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00736621  normal 
 
 
-
 
NC_012892  B21_00396  hypothetical protein  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  82.8  0.000000000000001  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
NC_011149  SeAg_B0491  transcriptional regulator HU subunit beta  43.33 
 
 
90 aa  83.2  0.000000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0126716  n/a   
 
 
-
 
NC_003910  CPS_3781  HU family DNA-binding protein  44.44 
 
 
90 aa  82.4  0.000000000000002  Colwellia psychrerythraea 34H  Bacteria  hitchhiker  0.0095051  n/a   
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  42.22 
 
 
90 aa  82.8  0.000000000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  43.33 
 
 
90 aa  82.4  0.000000000000002  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_010717  PXO_02474  DNA-binding protein HU  41.11 
 
 
90 aa  82  0.000000000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00213  DNA-binding protein  44.44 
 
 
101 aa  81.6  0.000000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002182  DNA-binding protein HU-alpha  44.44 
 
 
90 aa  81.3  0.000000000000004  Vibrio sp. Ex25  Bacteria  normal  0.131368  n/a   
 
 
-
 
NC_009457  VC0395_A1509  DNA-binding protein HU-beta  43.33 
 
 
90 aa  80.9  0.000000000000005  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000490467  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  42.22 
 
 
90 aa  80.9  0.000000000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  42.22 
 
 
90 aa  80.9  0.000000000000006  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  42.22 
 
 
90 aa  80.9  0.000000000000006  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  40 
 
 
90 aa  80.1  0.000000000000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  42.86 
 
 
91 aa  79.7  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_009832  Spro_1098  histone family protein DNA-binding protein  40 
 
 
101 aa  79.7  0.00000000000001  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00970005  hitchhiker  0.00000236625 
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  41.76 
 
 
91 aa  79.3  0.00000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  41.11 
 
 
90 aa  78.6  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  43.33 
 
 
90 aa  79  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  43.33 
 
 
90 aa  79.3  0.00000000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0576  histone family protein DNA-binding protein  41.11 
 
 
90 aa  78.6  0.00000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0418926 
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  43.82 
 
 
90 aa  79  0.00000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  43.82 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_002947  PP_2303  histone family protein DNA-binding protein  38.89 
 
 
90 aa  78.2  0.00000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.0561689  hitchhiker  0.000233767 
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_010322  PputGB1_1905  histone family protein DNA-binding protein  38.89 
 
 
90 aa  78.2  0.00000000000004  Pseudomonas putida GB-1  Bacteria  normal  0.173408  hitchhiker  0.000216257 
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  43.68 
 
 
90 aa  77.8  0.00000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3466  histone family protein DNA-binding protein  38.89 
 
 
90 aa  78.2  0.00000000000004  Pseudomonas putida F1  Bacteria  normal  0.360259  hitchhiker  0.000212777 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  41.11 
 
 
90 aa  78.2  0.00000000000004  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal 
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_008709  Ping_3218  DNA-binding protein HU alpha subunit  40.66 
 
 
91 aa  77.8  0.00000000000004  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.585838 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  43.82 
 
 
90 aa  77.8  0.00000000000005  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_012560  Avin_23600  histone-like DNA-binding protein  40 
 
 
90 aa  77.8  0.00000000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  43.82 
 
 
90 aa  77.8  0.00000000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2337  histone-like DNA-binding protein  43.33 
 
 
90 aa  77.8  0.00000000000005  Nitrosospira multiformis ATCC 25196  Bacteria  unclonable  0.0000000498066  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  43.82 
 
 
90 aa  77.8  0.00000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  42.7 
 
 
90 aa  77.4  0.00000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011312  VSAL_I0822  DNA-binding protein HU-beta  40 
 
 
98 aa  77.4  0.00000000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.172487  n/a   
 
 
-
 
NC_009140  SNSL254_pSN254_0022  DNA-binding protein HU  40 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00102315  hitchhiker  0.000567997 
 
 
-
 
NC_010577  XfasM23_0470  histone family protein DNA-binding protein  41.57 
 
 
94 aa  77.4  0.00000000000007  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01420  nucleoid DNA-binding protein  41.11 
 
 
90 aa  77  0.00000000000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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