8 homologs were found in PanDaTox collection
for query gene SbBS512_E4456 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009800  EcHS_A4792  SraJ RNA  100 
 
 
172 bp  341  4e-92  Escherichia coli HS  Bacteria  hitchhiker  0.00000000573025  n/a   
 
 
-
 
NC_010658  SbBS512_E4456  SraJ RNA  100 
 
 
172 bp  341  4e-92  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5239  SraJ RNA  100 
 
 
172 bp  341  4e-92  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4216  SraJ RNA  93.1 
 
 
174 bp  244  6e-63  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00072442  normal 
 
 
-
 
NC_011083  SeHA_C4264  SraJ RNA  93.1 
 
 
174 bp  244  6e-63  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  unclonable  0.0000137279  normal 
 
 
-
 
NC_011094  SeSA_A4147  SraJ RNA  93.1 
 
 
174 bp  244  6e-63  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.000000936919  normal 
 
 
-
 
NC_011149  SeAg_B4162  SraJ RNA  93.1 
 
 
174 bp  244  6e-63  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000000455588  n/a   
 
 
-
 
NC_011205  SeD_A4323  SraJ RNA  93.1 
 
 
174 bp  244  6e-63  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.0000729773  normal  0.69393 
 
 
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