8 homologs were found in PanDaTox collection
for query gene Saro_R0006 on replicon NC_007794
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007794  Saro_R0006  tRNA-Gln  100 
 
 
74 bp  147  4.0000000000000006e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_R0040  tRNA-Gln  100 
 
 
74 bp  147  4.0000000000000006e-34  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_R0054  tRNA-Gln  91.89 
 
 
74 bp  99.6  9e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.0280156  normal 
 
 
-
 
NC_013946  Mrub_R0003  tRNA-Gln  86.79 
 
 
74 bp  50.1  0.00007  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_R0049  tRNA-Gln  85.19 
 
 
74 bp  44.1  0.004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.192349  normal 
 
 
-
 
NC_009719  Plav_R0014  tRNA-Gln  85.19 
 
 
74 bp  44.1  0.004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_R0045  tRNA-Gln  85.19 
 
 
74 bp  44.1  0.004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  unclonable  0.0000000500622  n/a   
 
 
-
 
NC_013889  TK90_R0012  tRNA-Gln  85.19 
 
 
74 bp  44.1  0.004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0269689  normal 
 
 
-
 
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