7 homologs were found in PanDaTox collection
for query gene Sama_3442 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_3442  hypothetical protein  100 
 
 
191 aa  390  1e-108  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0263  hypothetical protein  60.84 
 
 
188 aa  212  1.9999999999999998e-54  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00232618  normal  0.0454843 
 
 
-
 
NC_010506  Swoo_0262  hypothetical protein  55.62 
 
 
226 aa  201  5e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.000492354 
 
 
-
 
NC_009092  Shew_3579  hypothetical protein  55.95 
 
 
183 aa  197  7e-50  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0041  hypothetical protein  37.43 
 
 
189 aa  114  6.9999999999999995e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.361132 
 
 
-
 
NC_009943  Dole_0882  hypothetical protein  33.14 
 
 
184 aa  100  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1611  hypothetical protein  30.23 
 
 
188 aa  73.2  0.000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.297862  n/a   
 
 
-
 
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