6 homologs were found in PanDaTox collection
for query gene Sama_3113 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_3113  hypothetical protein  100 
 
 
757 aa  1546    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0847993 
 
 
-
 
NC_008577  Shewana3_1112  hypothetical protein  25.11 
 
 
901 aa  139  2e-31  Shewanella sp. ANA-3  Bacteria  normal  0.0403332  normal 
 
 
-
 
NC_010506  Swoo_0423  hypothetical protein  27.94 
 
 
809 aa  123  9.999999999999999e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1180  hypothetical protein  24.93 
 
 
902 aa  118  5e-25  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0686  hypothetical protein  27.94 
 
 
732 aa  86.7  0.000000000000002  Shewanella denitrificans OS217  Bacteria  normal  0.621901  n/a   
 
 
-
 
NC_009783  VIBHAR_00117  hypothetical protein  24.47 
 
 
598 aa  46.2  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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