295 homologs were found in PanDaTox collection
for query gene Sama_2707 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2707  gamma-carboxymuconolactone decarboxylase subunit-like protein  100 
 
 
139 aa  288  2e-77  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3046  carboxymuconolactone decarboxylase  78.3 
 
 
106 aa  177  2.9999999999999997e-44  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4122  Carboxymuconolactone decarboxylase  67.01 
 
 
107 aa  135  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.847034 
 
 
-
 
NC_007908  Rfer_2441  carboxymuconolactone decarboxylase  62.89 
 
 
276 aa  130  6e-30  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1954  hypothetical protein  58.82 
 
 
298 aa  129  1.0000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.513058  normal  0.328983 
 
 
-
 
NC_010465  YPK_2194  carboxymuconolactone decarboxylase  55 
 
 
140 aa  129  1.0000000000000001e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2086  carboxymuconolactone decarboxylase family protein  55 
 
 
140 aa  129  1.0000000000000001e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  decreased coverage  0.000000000641307  n/a   
 
 
-
 
NC_010159  YpAngola_A2482  carboxymuconolactone decarboxylase family protein  55 
 
 
140 aa  129  1.0000000000000001e-29  Yersinia pestis Angola  Bacteria  decreased coverage  0.0000000156087  normal  0.0594202 
 
 
-
 
NC_012850  Rleg_2469  Carboxymuconolactone decarboxylase  60.42 
 
 
138 aa  126  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.799907  normal 
 
 
-
 
NC_011886  Achl_2114  Carboxymuconolactone decarboxylase  59.38 
 
 
107 aa  122  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000414856 
 
 
-
 
NC_010524  Lcho_2144  carboxymuconolactone decarboxylase  61.86 
 
 
268 aa  122  2e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000390984 
 
 
-
 
NC_009954  Cmaq_0470  carboxymuconolactone decarboxylase  60.87 
 
 
238 aa  119  1.9999999999999998e-26  Caldivirga maquilingensis IC-167  Archaea  normal  0.0123066  normal  0.044727 
 
 
-
 
NC_007511  Bcep18194_B0521  carboxymuconolactone decarboxylase  55.34 
 
 
108 aa  118  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  hitchhiker  0.00160379  normal 
 
 
-
 
NC_003296  RS03072  4-carboxymuconolactone decarboxylase protein  57.28 
 
 
108 aa  117  7.999999999999999e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5713  Carboxymuconolactone decarboxylase  50.49 
 
 
107 aa  116  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1910  carboxymuconolactone decarboxylase  53.85 
 
 
106 aa  112  1.0000000000000001e-24  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1625  gamma-carboxymuconolactone decarboxylase subunit-like protein  52.58 
 
 
104 aa  109  1.0000000000000001e-23  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0843  carboxymuconolactone decarboxylase  57.61 
 
 
259 aa  105  3e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.536951  normal  0.096524 
 
 
-
 
NC_008531  LEUM_1085  gamma-carboxymuconolactone decarboxylase subunit-like protein  47.12 
 
 
105 aa  105  3e-22  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0564788  n/a   
 
 
-
 
NC_012560  Avin_32360  Carboxymuconolactone decarboxylase protein  52.17 
 
 
256 aa  102  2e-21  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0655  Carboxymuconolactone decarboxylase  55.06 
 
 
398 aa  100  8e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.47766  normal  0.236933 
 
 
-
 
NC_009832  Spro_1459  carboxymuconolactone decarboxylase  53.19 
 
 
105 aa  100  9e-21  Serratia proteamaculans 568  Bacteria  normal  normal  0.917437 
 
 
-
 
NC_009620  Smed_4453  carboxymuconolactone decarboxylase  44.55 
 
 
396 aa  99.8  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.0765828  normal 
 
 
-
 
NC_011025  MARTH_orf083  carboxymuconolactone decarboxylase family protein  47.12 
 
 
108 aa  99.4  2e-20  Mycoplasma arthritidis 158L3-1  Bacteria  normal  0.0224766  n/a   
 
 
-
 
NC_010655  Amuc_1806  Carboxymuconolactone decarboxylase  48.42 
 
 
255 aa  97.4  5e-20  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.0201167 
 
 
-
 
NC_008254  Meso_3910  carboxymuconolactone decarboxylase  49.44 
 
 
264 aa  96.7  1e-19  Chelativorans sp. BNC1  Bacteria  normal  0.984224  n/a   
 
 
-
 
NC_010501  PputW619_3089  carboxymuconolactone decarboxylase  45.45 
 
 
265 aa  95.1  3e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0425  carboxymuconolactone decarboxylase family protein  47.25 
 
 
105 aa  93.2  1e-18  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0608  Carboxymuconolactone decarboxylase  53.49 
 
 
99 aa  93.2  1e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5696  carboxymuconolactone decarboxylase  47.31 
 
 
283 aa  93.2  1e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6060  carboxymuconolactone decarboxylase  47.31 
 
 
283 aa  93.2  1e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0272264  normal 
 
 
-
 
NC_010625  Bphy_6793  carboxymuconolactone decarboxylase  45.16 
 
 
265 aa  92.4  2e-18  Burkholderia phymatum STM815  Bacteria  normal  0.215429  normal  0.323948 
 
 
-
 
NC_011071  Smal_0161  Carboxymuconolactone decarboxylase  49.47 
 
 
105 aa  91.7  3e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1761  carboxymuconolactone decarboxylase  49.45 
 
 
239 aa  89.4  2e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.0864645  normal 
 
 
-
 
NC_003909  BCE_2018  carboxymuconolactone decarboxylase family protein  46.51 
 
 
107 aa  85.5  2e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.0370669  n/a   
 
 
-
 
NC_011658  BCAH187_A2039  4-carboxymuconolactone decarboxylase  48.81 
 
 
107 aa  85.9  2e-16  Bacillus cereus AH187  Bacteria  normal  0.202589  n/a   
 
 
-
 
NC_011773  BCAH820_1975  4-carboxymuconolactone decarboxylase  47.62 
 
 
107 aa  85.5  3e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.05823e-17 
 
 
-
 
NC_006274  BCZK1757  4-carboxymuconolactone decarboxylase  47.62 
 
 
107 aa  84.7  4e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2865  4-carboxymuconolactone decarboxylase, putative  42.55 
 
 
262 aa  84  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.133043  n/a   
 
 
-
 
NC_009674  Bcer98_1752  carboxymuconolactone decarboxylase  42.7 
 
 
102 aa  82.4  0.000000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00315461  n/a   
 
 
-
 
NC_007492  Pfl01_2806  carboxymuconolactone decarboxylase  47.78 
 
 
112 aa  82.4  0.000000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1800  carboxymuconolactone decarboxylase family protein  46.91 
 
 
103 aa  81.6  0.000000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1940  carboxymuconolactone decarboxylase family protein  46.91 
 
 
103 aa  81.6  0.000000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1515  Carboxymuconolactone decarboxylase  46.32 
 
 
110 aa  80.9  0.000000000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.688858  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5463  carboxymuconolactone decarboxylase  43.33 
 
 
110 aa  80.9  0.000000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0245296  normal  0.0559461 
 
 
-
 
NC_013517  Sterm_2660  Carboxymuconolactone decarboxylase  44.83 
 
 
244 aa  79.3  0.00000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2082  carboxymuconolactone decarboxylase  38.14 
 
 
129 aa  79  0.00000000000002  Pseudomonas putida F1  Bacteria  normal  normal  0.984068 
 
 
-
 
NC_007778  RPB_0830  carboxymuconolactone decarboxylase  38.46 
 
 
126 aa  77.8  0.00000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2255  carboxymuconolactone decarboxylase  38.71 
 
 
129 aa  77.8  0.00000000000005  Pseudomonas putida W619  Bacteria  normal  0.344767  normal 
 
 
-
 
NC_002947  PP_3648  carboxymuconolactone decarboxylase  38.71 
 
 
129 aa  77.4  0.00000000000007  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00963465  normal  0.158809 
 
 
-
 
NC_007958  RPD_0939  carboxymuconolactone decarboxylase  36.46 
 
 
126 aa  76.3  0.0000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.947177  normal 
 
 
-
 
NC_010322  PputGB1_2260  carboxymuconolactone decarboxylase  39.13 
 
 
129 aa  76.3  0.0000000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1856  carboxymuconolactone decarboxylase  43.48 
 
 
275 aa  76.3  0.0000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.519725  normal  0.376905 
 
 
-
 
NC_009077  Mjls_5179  carboxymuconolactone decarboxylase  41.49 
 
 
123 aa  75.9  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  0.351451  normal  0.0612334 
 
 
-
 
NC_008687  Pden_3257  carboxymuconolactone decarboxylase  39.56 
 
 
148 aa  73.9  0.0000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.146193  normal  0.0594926 
 
 
-
 
NC_008687  Pden_3215  carboxymuconolactone decarboxylase  37.36 
 
 
124 aa  73.2  0.000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5222  Carboxymuconolactone decarboxylase  35.42 
 
 
126 aa  72.4  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4879  carboxymuconolactone decarboxylase  40.45 
 
 
123 aa  71.6  0.000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0552117 
 
 
-
 
NC_008146  Mmcs_4793  carboxymuconolactone decarboxylase  40.45 
 
 
123 aa  71.6  0.000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.575162  n/a   
 
 
-
 
NC_013165  Shel_01020  uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein  33.33 
 
 
108 aa  71.2  0.000000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.141102 
 
 
-
 
NC_010501  PputW619_2296  4-carboxymuconolactone decarboxylase  38.89 
 
 
123 aa  70.9  0.000000000005  Pseudomonas putida W619  Bacteria  normal  0.0265397  normal  0.659303 
 
 
-
 
NC_013422  Hneap_1703  Carboxymuconolactone decarboxylase  34.23 
 
 
131 aa  70.9  0.000000000006  Halothiobacillus neapolitanus c2  Bacteria  normal  0.232307  n/a   
 
 
-
 
NC_009832  Spro_2504  4-carboxymuconolactone decarboxylase  40.86 
 
 
129 aa  70.5  0.000000000008  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2653  Carboxymuconolactone decarboxylase  40.4 
 
 
138 aa  70.5  0.000000000008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_1568  carboxymuconolactone decarboxylase  40.22 
 
 
109 aa  68.9  0.00000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.630321 
 
 
-
 
NC_007974  Rmet_4016  3-oxoadipate enol-lactonase  40.96 
 
 
392 aa  68.9  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00993372  normal 
 
 
-
 
NC_009439  Pmen_3442  4-carboxymuconolactone decarboxylase  36.47 
 
 
127 aa  68.9  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.222691  normal 
 
 
-
 
NC_009921  Franean1_4519  carboxymuconolactone decarboxylase  33.33 
 
 
125 aa  68.6  0.00000000003  Frankia sp. EAN1pec  Bacteria  normal  0.591188  normal 
 
 
-
 
NC_008699  Noca_1011  4-carboxymuconolactone decarboxylase  35.07 
 
 
402 aa  68.2  0.00000000004  Nocardioides sp. JS614  Bacteria  normal  0.101506  n/a   
 
 
-
 
NC_010002  Daci_2568  carboxymuconolactone decarboxylase  36.67 
 
 
132 aa  68.2  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.136392 
 
 
-
 
NC_008786  Veis_2974  4-carboxymuconolactone decarboxylase  33.33 
 
 
125 aa  67.8  0.00000000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4821  carboxymuconolactone decarboxylase  35.16 
 
 
126 aa  67.8  0.00000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0925911  normal 
 
 
-
 
NC_007492  Pfl01_3235  4-carboxymuconolactone decarboxylase  36.14 
 
 
129 aa  67.4  0.00000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.621974  normal 
 
 
-
 
NC_012791  Vapar_3680  Carboxymuconolactone decarboxylase  40.4 
 
 
152 aa  67  0.00000000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1535  3-oxoadipate enol-lactonase  37.5 
 
 
373 aa  67  0.00000000008  Spirosoma linguale DSM 74  Bacteria  normal  0.267161  normal  0.120644 
 
 
-
 
NC_009338  Mflv_1912  carboxymuconolactone decarboxylase  34.07 
 
 
126 aa  67  0.00000000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.955365  normal  0.169242 
 
 
-
 
NC_004347  SO_0083  carboxymuconolactone decarboxylase family protein  37.23 
 
 
128 aa  66.2  0.0000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1479  carboxymuconolactone decarboxylase  41.76 
 
 
133 aa  66.6  0.0000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2188  carboxymuconolactone decarboxylase  40.22 
 
 
129 aa  66.6  0.0000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3139  putative 4-carboxymuconolactone decarboxylase  41.11 
 
 
132 aa  65.5  0.0000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.287088  n/a   
 
 
-
 
NC_009665  Shew185_0083  carboxymuconolactone decarboxylase  37.23 
 
 
128 aa  65.5  0.0000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5022  4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase  38.55 
 
 
396 aa  65.9  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.391243  n/a   
 
 
-
 
NC_007348  Reut_B5696  carboxymuconolactone decarboxylase  41.57 
 
 
130 aa  65.5  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2209  carboxymuconolactone decarboxylase family protein  38.89 
 
 
132 aa  65.5  0.0000000002  Burkholderia thailandensis E264  Bacteria  normal  0.231556  n/a   
 
 
-
 
NC_006348  BMA1373  carboxymuconolactone decarboxylase family protein  36.46 
 
 
132 aa  65.5  0.0000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.378973  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1557  4-carboxymuconolactone decarboxylase  33.33 
 
 
128 aa  65.1  0.0000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0086  Carboxymuconolactone decarboxylase  37.23 
 
 
128 aa  65.1  0.0000000003  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_1134  carboxymuconolactone decarboxylase family protein  36.46 
 
 
132 aa  65.5  0.0000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0034  carboxymuconolactone decarboxylase family protein  36.46 
 
 
132 aa  65.5  0.0000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0633482  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1863  carboxymuconolactone decarboxylase family protein  36.46 
 
 
132 aa  65.5  0.0000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_02340  Carboxymuconolactone decarboxylase  42.86 
 
 
138 aa  65.1  0.0000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.0293457  n/a   
 
 
-
 
NC_009052  Sbal_4266  carboxymuconolactone decarboxylase  37.23 
 
 
128 aa  65.1  0.0000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0089  carboxymuconolactone decarboxylase  37.23 
 
 
128 aa  65.1  0.0000000003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1487  3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase  33.33 
 
 
128 aa  65.1  0.0000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1204  3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase  33.33 
 
 
128 aa  65.1  0.0000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0060  4-carboxymuconolactone decarboxylase  33.33 
 
 
128 aa  65.1  0.0000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.34038  n/a   
 
 
-
 
NC_012856  Rpic12D_2083  Carboxymuconolactone decarboxylase  36.96 
 
 
123 aa  64.7  0.0000000004  Ralstonia pickettii 12D  Bacteria  normal  normal  0.995495 
 
 
-
 
NC_008321  Shewmr4_0089  carboxymuconolactone decarboxylase  36.17 
 
 
128 aa  64.7  0.0000000004  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_0521  carboxymuconolactone decarboxylase family protein  38.38 
 
 
127 aa  64.3  0.0000000006  Synechococcus sp. CC9605  Bacteria  normal  normal  0.66457 
 
 
-
 
NC_010681  Bphyt_1817  Carboxymuconolactone decarboxylase  37.78 
 
 
152 aa  63.9  0.0000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.291528 
 
 
-
 
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