13 homologs were found in PanDaTox collection
for query gene SYO3AOP1_1462 on replicon NC_010730
Organism: Sulfurihydrogenibium sp. YO3AOP1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010730  SYO3AOP1_1462  hypothetical protein  100 
 
 
1273 aa  2446    Sulfurihydrogenibium sp. YO3AOP1  Bacteria  decreased coverage  0.0000197368  n/a   
 
 
-
 
NC_011126  HY04AAS1_1264  hypothetical protein  25.29 
 
 
1165 aa  73.6  0.00000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2482  hypothetical protein  25.23 
 
 
1462 aa  56.2  0.000003  Magnetococcus sp. MC-1  Bacteria  normal  0.915526  normal  0.262243 
 
 
-
 
NC_011369  Rleg2_3627  protein of unknown function DUF490  30.2 
 
 
2140 aa  55.8  0.000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.1533 
 
 
-
 
NC_009636  Smed_2888  hypothetical protein  28.68 
 
 
1869 aa  52.8  0.00005  Sinorhizobium medicae WSM419  Bacteria  normal  0.547557  normal 
 
 
-
 
NC_012850  Rleg_3915  protein of unknown function DUF490  30.2 
 
 
2032 aa  52.4  0.00006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.411951 
 
 
-
 
NC_009511  Swit_4828  hypothetical protein  25.97 
 
 
1392 aa  51.2  0.0001  Sphingomonas wittichii RW1  Bacteria  normal  0.470253  normal  0.310225 
 
 
-
 
NC_008009  Acid345_2474  hypothetical protein  26.06 
 
 
1369 aa  48.1  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.291418 
 
 
-
 
NC_010511  M446_6385  hypothetical protein  26.17 
 
 
1448 aa  47.8  0.001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2388  hypothetical protein  26.92 
 
 
1451 aa  47.4  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.130143  normal  0.0161246 
 
 
-
 
NC_011757  Mchl_2993  protein of unknown function DUF490  22.79 
 
 
1463 aa  46.6  0.003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.407315 
 
 
-
 
NC_011894  Mnod_6778  protein of unknown function DUF490  25.97 
 
 
1530 aa  46.2  0.004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2396  hypothetical protein  24 
 
 
1335 aa  45.4  0.008  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
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