62 homologs were found in PanDaTox collection
for query gene SO_3667 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_3667  hypothetical protein  100 
 
 		 185 aa  382  1e-105  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3233  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  96.76 
 
 		 185 aa  370  1e-102  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0067733  normal  0.916764 
 
 
-
 
NC_009438  Sputcn32_0968  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  87.57 
 
 		 185 aa  342  2e-93  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  87.03 
 
 		 185 aa  340  7e-93  Shewanella baltica OS185  Bacteria  normal  0.208688  n/a   
 
 
-
 
NC_011663  Sbal223_3336  pyridoxamine 5'-phosphate oxidase-related FMN-binding  87.03 
 
 		 185 aa  340  7e-93  Shewanella baltica OS223  Bacteria  normal  0.195481  normal  1 
 
 
-
 
NC_009997  Sbal195_1056  pyridoxamine 5'-phosphate oxidase-related FMN-binding  86.49 
 
 		 185 aa  338  2e-92  Shewanella baltica OS195  Bacteria  normal  0.957646  normal  1 
 
 
-
 
NC_009052  Sbal_0954  pyridoxamine 5'-phosphate oxidase-related FMN-binding  86.49 
 
 		 185 aa  337  5.9999999999999996e-92  Shewanella baltica OS155  Bacteria  normal  0.0302738  n/a   
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  75.27 
 
 		 189 aa  286  1e-76  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
NC_010506  Swoo_4002  pyridoxamine 5'-phosphate oxidase-related FMN-binding  76.44 
 
 		 197 aa  280  9e-75  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.285219 
 
 
-
 
NC_007954  Sden_0792  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  68.21 
 
 		 176 aa  253  1.0000000000000001e-66  Shewanella denitrificans OS217  Bacteria  normal  0.0127904  n/a   
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  50 
 
 		 176 aa  188  4e-47  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0330  heme-binding protein HutZ  49.7 
 
 		 176 aa  187  9e-47  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  48.48 
 
 		 176 aa  181  6e-45  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  47.88 
 
 		 176 aa  178  4e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_0722  heme binding protein  41.18 
 
 		 173 aa  161  5.0000000000000005e-39  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36 
 
 		 165 aa  115  5e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.448208  normal  1 
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.8 
 
 		 173 aa  109  3e-23  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0671  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  34.01 
 
 		 167 aa  99.8  2e-20  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_0587  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.61 
 
 		 252 aa  93.2  2e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_0786  heme-utilization protein HutZ, putative  33.33 
 
 		 173 aa  84.7  6e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0929  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 		 174 aa  85.1  6e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012039  Cla_0339  conserved hypothetical protein, pyridoxamine 5'-phosphate oxidase family  32.19 
 
 		 168 aa  84.7  6e-16  Campylobacter lari RM2100  Bacteria  normal  0.988244  n/a   
 
 
-
 
NC_008787  CJJ81176_1600  hypothetical protein  32.3 
 
 		 251 aa  81.6  0.000000000000006  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_0652  pyridoxamine 5'-phosphate oxidase family protein  29.63 
 
 		 283 aa  81.6  0.000000000000006  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00637649  n/a   
 
 
-
 
NC_003912  CJE1785  hypothetical protein  31.68 
 
 		 251 aa  79.7  0.00000000000002  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_008599  CFF8240_1758  pyridoxamine 5'-phosphate oxidase family protein  37.8 
 
 		 248 aa  80.1  0.00000000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1967  hypothetical protein  31.21 
 
 		 247 aa  79.3  0.00000000000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.95 
 
 		 199 aa  67.4  0.0000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.57 
 
 		 171 aa  66.6  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.15 
 
 		 167 aa  61.6  0.000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  28.86 
 
 		 194 aa  59.7  0.00000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.75 
 
 		 170 aa  59.3  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.97 
 
 		 166 aa  56.6  0.0000002  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.97 
 
 		 166 aa  56.6  0.0000002  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.49 
 
 		 162 aa  55.8  0.0000003  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.06 
 
 		 243 aa  55.1  0.0000005  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  30.26 
 
 		 289 aa  55.1  0.0000005  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.51 
 
 		 270 aa  55.5  0.0000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.602445 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.06 
 
 		 243 aa  54.3  0.000001  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  30.53 
 
 		 243 aa  53.1  0.000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.61 
 
 		 276 aa  53.5  0.000002  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.87 
 
 		 171 aa  52.4  0.000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.3 
 
 		 244 aa  51.6  0.000007  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.7 
 
 		 276 aa  50.1  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  29.29 
 
 		 244 aa  47.4  0.0001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.03 
 
 		 171 aa  47.8  0.0001  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.62 
 
 		 251 aa  47  0.0002  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.51 
 
 		 244 aa  47  0.0002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.45404 
 
 
-
 
NC_002977  MCA0309  hypothetical protein  27.34 
 
 		 238 aa  46.6  0.0002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  27.59 
 
 		 244 aa  46.2  0.0003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.36 
 
 		 244 aa  45.4  0.0005  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  28.37 
 
 		 245 aa  43.9  0.001  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.85 
 
 		 247 aa  43.9  0.001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_009036  Sbal_4453  hypothetical protein  33.33 
 
 		 107 aa  44.3  0.001  Shewanella baltica OS155  Bacteria  normal  1  normal  0.986317 
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.16 
 
 		 271 aa  43.5  0.002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012039  Cla_0454  hypothetical protein  31.25 
 
 		 89 aa  43.5  0.002  Campylobacter lari RM2100  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.22 
 
 		 249 aa  43.1  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_0916  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.75 
 
 		 172 aa  42.7  0.003  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00374077  normal  1 
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  23.6 
 
 		 267 aa  43.1  0.003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.42 
 
 		 194 aa  42  0.005  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  24.79 
 
 		 163 aa  41.6  0.006  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal  1 
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.44 
 
 		 268 aa  42  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
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