8 homologs were found in PanDaTox collection
for query gene SO_2133 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_2133  hypothetical protein  100 
 
 		 554 aa  1108    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007964  Nham_3709  hypothetical protein  24.14 
 
 		 1306 aa  77  0.0000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009051  Memar_1474  hypothetical protein  21.79 
 
 		 1625 aa  56.6  0.000001  Methanoculleus marisnigri JR1  Archaea  normal  0.109086  n/a   
 
 
-
 
NC_014151  Cfla_0748  hypothetical protein  24.21 
 
 		 1026 aa  52.8  0.00002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0431766  normal  0.0425394 
 
 
-
 
NC_008321  Shewmr4_3209  putative transcriptional regulator  24.65 
 
 		 1687 aa  48.9  0.0002  Shewanella sp. MR-4  Bacteria  normal  1  unclonable  0.000000000587168 
 
 
-
 
NC_009507  Swit_5338  hypothetical protein  34.41 
 
 		 1934 aa  48.5  0.0003  Sphingomonas wittichii RW1  Bacteria  normal  0.625438  normal  1 
 
 
-
 
NC_013521  Sked_31370  hypothetical protein  21.3 
 
 		 1082 aa  48.9  0.0003  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.114699 
 
 
-
 
NC_014165  Tbis_3292  hypothetical protein  21.12 
 
 		 985 aa  46.2  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.162566 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>