10 homologs were found in PanDaTox collection
for query gene SNSL254_pSN254_0075 on replicon NC_009140
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009140  SNSL254_pSN254_0075  hypothetical protein  100 
 
 		 305 aa  627  1e-179  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008826  Mpe_B0366  sex pilus assembly protein  26.32 
 
 		 305 aa  79  0.0000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.188923  normal  1 
 
 
-
 
NC_011761  AFE_1080  TraK lipoprotein, putative  27.27 
 
 		 390 aa  65.1  0.000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1389  outer-membrane type III secretion protein HrcC  33.33 
 
 		 699 aa  64.7  0.000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1200  outer-membrane type III secretion protein HrcC  32.56 
 
 		 700 aa  62  0.00000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.138947 
 
 
-
 
NC_012912  Dd1591_1907  type III secretion outer membrane pore, YscC/HrcC family  29.7 
 
 		 691 aa  61.2  0.00000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0023  YscC/HrcC family type III secretion outer membrane protein  29.03 
 
 		 696 aa  60.5  0.00000004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008573  Shewana3_4259  putative periplasmic protein  25 
 
 		 405 aa  59.7  0.00000006  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00239764  normal  0.16431 
 
 
-
 
NC_010070  Bmul_6228  hypothetical protein  24.09 
 
 		 330 aa  57.4  0.0000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.418137  normal  1 
 
 
-
 
NC_012917  PC1_2192  type III secretion outer membrane pore, YscC/HrcC family  30.39 
 
 		 689 aa  55.5  0.000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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