27 homologs were found in PanDaTox collection
for query gene SNSL254_A0358 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011205  SeD_A0349  DNA-binding transcriptional regulator Crl  100 
 
 		 133 aa  277  4e-74  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B0353  DNA-binding transcriptional regulator Crl  100 
 
 		 133 aa  277  4e-74  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.832073  n/a   
 
 
-
 
NC_011080  SNSL254_A0358  DNA-binding transcriptional regulator Crl  100 
 
 		 133 aa  277  4e-74  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011083  SeHA_C0360  DNA-binding transcriptional regulator Crl  99.25 
 
 		 133 aa  275  1e-73  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  hitchhiker  0.00000000254293 
 
 
-
 
NC_011094  SeSA_A0368  DNA-binding transcriptional regulator Crl  99.25 
 
 		 133 aa  275  2e-73  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.998647 
 
 
-
 
NC_009800  EcHS_A0267  DNA-binding transcriptional regulator Crl  84.21 
 
 		 133 aa  242  9.999999999999999e-64  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0272  DNA-binding transcriptional regulator Crl  84.21 
 
 		 133 aa  242  9.999999999999999e-64  Escherichia coli E24377A  Bacteria  normal  0.795685  n/a   
 
 
-
 
NC_010658  SbBS512_E0237  DNA-binding transcriptional regulator Crl  84.21 
 
 		 133 aa  242  9.999999999999999e-64  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_00235  DNA-binding transcriptional regulator  84.21 
 
 		 133 aa  242  9.999999999999999e-64  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3341  DNA-binding transcriptional regulator Crl  84.21 
 
 		 133 aa  242  9.999999999999999e-64  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
CP001637  EcDH1_3367  transcriptional regulator Crl  83.46 
 
 		 133 aa  241  1.9999999999999999e-63  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_0285  DNA-binding transcriptional regulator Crl  83.46 
 
 		 133 aa  240  3.9999999999999997e-63  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.18627  normal  0.45352 
 
 
-
 
NC_010498  EcSMS35_0294  DNA-binding transcriptional regulator Crl  83.46 
 
 		 133 aa  239  7.999999999999999e-63  Escherichia coli SMS-3-5  Bacteria  normal  1  hitchhiker  0.00455397 
 
 
-
 
NC_012892  B21_00238  hypothetical protein  82.71 
 
 		 133 aa  237  4e-62  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_0766  DNA-binding transcriptional regulator Crl  76.69 
 
 		 133 aa  217  3.9999999999999997e-56  Enterobacter sp. 638  Bacteria  normal  1  normal  0.129578 
 
 
-
 
NC_009832  Spro_0966  DNA-binding transcriptional regulator Crl  69.92 
 
 		 133 aa  205  1e-52  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_3289  DNA-binding transcriptional regulator Crl  66.17 
 
 		 133 aa  197  3.9999999999999996e-50  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.405312  n/a   
 
 
-
 
NC_010159  YpAngola_A3302  DNA-binding transcriptional regulator Crl  66.17 
 
 		 133 aa  197  3.9999999999999996e-50  Yersinia pestis Angola  Bacteria  hitchhiker  0.00000844173  hitchhiker  0.00236591 
 
 
-
 
NC_009708  YpsIP31758_3151  DNA-binding transcriptional regulator Crl  65.41 
 
 		 133 aa  195  2.0000000000000003e-49  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.719284  n/a   
 
 
-
 
NC_013421  Pecwa_3432  DNA-binding transcriptional regulator Crl  62.39 
 
 		 124 aa  160  7e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  0.105388  n/a   
 
 
-
 
NC_012917  PC1_3285  DNA-binding transcriptional regulator Crl  59.83 
 
 		 124 aa  155  2e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_0934  transcriptional regulator Crl  62.62 
 
 		 119 aa  150  5e-36  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0899  transcriptional regulator Crl  62.62 
 
 		 119 aa  145  2.0000000000000003e-34  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01161  DNA-binding transcriptional regulator Crl  49.5 
 
 		 135 aa  115  1.9999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004269  transcriptional regulator Crl  49.5 
 
 		 129 aa  112  2.0000000000000002e-24  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00560329  n/a   
 
 
-
 
NC_009457  VC0395_A1865  DNA-binding transcriptional regulator Crl  48.51 
 
 		 129 aa  106  1e-22  Vibrio cholerae O395  Bacteria  decreased coverage  0.00000381316  n/a   
 
 
-
 
NC_008709  Ping_2954  DNA-binding transcriptional regulator Crl  35.29 
 
 		 130 aa  74.7  0.0000000000004  Psychromonas ingrahamii 37  Bacteria  normal  0.405401  normal  0.114095 
 
 
-
 
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