8 homologs were found in PanDaTox collection
for query gene SNSL254_A0119 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A0119  SgrS RNA  100 
 
 		 238 bp  472  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.163644  normal  0.42599 
 
 
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NC_011149  SeAg_B0123  SgrS RNA  100 
 
 		 238 bp  472  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A0116  SgrS RNA  100 
 
 		 238 bp  472  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011083  SeHA_C0118  SgrS RNA  99.58 
 
 		 238 bp  464  1e-129  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.165987 
 
 
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NC_011094  SeSA_A0123  SgrS RNA  99.16 
 
 		 238 bp  456  1.0000000000000001e-126  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.980235  normal  0.0251014 
 
 
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NC_011353  ECH74115_0077  SgrS RNA  96.97 
 
 		 226 bp  58  0.000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
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NC_010658  SbBS512_E4961  SgrS RNA  92.5 
 
 		 226 bp  56  0.000004  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_R0093    100 
 
 		 73 bp  54  0.00002  Escherichia coli ATCC 8739  Bacteria  normal  1  hitchhiker  0.00000241468 
 
 
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