25 homologs were found in PanDaTox collection
for query gene SERP1621 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002976  SERP1621  DNA-binding protein HU, putative  100 
 
 		 109 aa  218  3e-56  Staphylococcus epidermidis RP62A  Bacteria  decreased coverage  0.000303711  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  35.71 
 
 		 91 aa  45.4  0.0002  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  30 
 
 		 91 aa  43.9  0.0007  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  30 
 
 		 90 aa  43.9  0.0007  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  30 
 
 		 90 aa  43.1  0.001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  30.69 
 
 		 91 aa  43.1  0.001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  33.66 
 
 		 90 aa  42.4  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  33.66 
 
 		 90 aa  42.4  0.002  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_010003  Pmob_1910  histone family protein DNA-binding protein  33.66 
 
 		 90 aa  42.7  0.002  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000000311196  n/a   
 
 
-
 
NC_008346  Swol_0648  non-specific DNA-binding protein HBsu  32.29 
 
 		 110 aa  42.4  0.002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271458  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  35.37 
 
 		 90 aa  41.2  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  31.68 
 
 		 90 aa  41.2  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  31.68 
 
 		 90 aa  41.2  0.005  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  29 
 
 		 90 aa  40.8  0.006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  29 
 
 		 90 aa  40.4  0.009  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  31.37 
 
 		 90 aa  40  0.01  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
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