10 homologs were found in PanDaTox collection
for query gene Rsph17029_3509 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009050  Rsph17029_3509  putative phage integrase family protein  100 
 
 
190 aa  384  1e-106  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.389848  normal 
 
 
-
 
NC_009049  Rsph17029_1842  putative phage integrase family protein  91.07 
 
 
113 aa  202  3e-51  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3313  phage integrase family protein  58.02 
 
 
430 aa  175  4e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1902  phage integrase  54.88 
 
 
422 aa  172  1.9999999999999998e-42  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.0000183596  n/a   
 
 
-
 
NC_007802  Jann_1997  phage integrase  48.78 
 
 
422 aa  154  5.0000000000000005e-37  Jannaschia sp. CCS1  Bacteria  normal  0.559264  normal  0.395324 
 
 
-
 
NC_007802  Jann_3521  phage integrase  49.39 
 
 
422 aa  154  8e-37  Jannaschia sp. CCS1  Bacteria  normal  hitchhiker  0.00222857 
 
 
-
 
NC_011894  Mnod_6823  integrase family protein  28.86 
 
 
358 aa  76.6  0.0000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0192  integrase family protein  29.22 
 
 
461 aa  58.5  0.00000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.108985  normal 
 
 
-
 
NC_009667  Oant_2329  phage integrase family protein  24.14 
 
 
454 aa  43.9  0.001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0957732  n/a   
 
 
-
 
NC_011989  Avi_3428  phage integrase protein  25.33 
 
 
440 aa  42.4  0.004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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