16 homologs were found in PanDaTox collection
for query gene Rsph17029_1246 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_1246  hypothetical protein  100 
 
 
197 aa  399  9.999999999999999e-111  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.137122  normal 
 
 
-
 
NC_007493  RSP_2588  hypothetical protein  98.48 
 
 
197 aa  392  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1935  hypothetical protein  82.74 
 
 
197 aa  335  1.9999999999999998e-91  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0031  hypothetical protein  60 
 
 
196 aa  193  1e-48  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3947  hypothetical protein  45.74 
 
 
212 aa  171  5e-42  Sinorhizobium medicae WSM419  Bacteria  normal  0.0213585  normal 
 
 
-
 
NC_009952  Dshi_0472  hypothetical protein  40.22 
 
 
204 aa  140  9.999999999999999e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5007  hypothetical protein  38.2 
 
 
202 aa  129  3e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.536268  normal  0.174811 
 
 
-
 
NC_011894  Mnod_5311  hypothetical protein  38.98 
 
 
201 aa  127  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1803  hypothetical protein  38 
 
 
209 aa  126  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.0310445  normal  0.397066 
 
 
-
 
NC_009720  Xaut_0024  hypothetical protein  38.8 
 
 
212 aa  125  5e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.767481 
 
 
-
 
NC_011757  Mchl_2187  hypothetical protein  37.5 
 
 
209 aa  124  9e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.17078 
 
 
-
 
NC_010172  Mext_1852  hypothetical protein  37.5 
 
 
209 aa  124  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2715  hypothetical protein  36.22 
 
 
212 aa  108  4.0000000000000004e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.700746  normal  0.187677 
 
 
-
 
NC_009485  BBta_5949  hypothetical protein  31.25 
 
 
204 aa  108  6e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.272286  normal 
 
 
-
 
NC_011666  Msil_1584  hypothetical protein  33.15 
 
 
227 aa  94.7  7e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.224365 
 
 
-
 
NC_007925  RPC_0250  hypothetical protein  32.97 
 
 
127 aa  55.5  0.0000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.66839  normal  0.167361 
 
 
-
 
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