121 homologs were found in PanDaTox collection
for query gene Rsph17029_0169 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_1517  HNS family histone-like protein  100 
 
 
104 aa  208  2e-53  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.632748  n/a   
 
 
-
 
NC_009049  Rsph17029_0169  histone family protein nucleoid-structuring protein H-NS  100 
 
 
104 aa  208  2e-53  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.485688 
 
 
-
 
NC_009428  Rsph17025_2961  histone family protein nucleoid-structuring protein H-NS  97.12 
 
 
104 aa  187  4e-47  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0570093 
 
 
-
 
NC_009432  Rsph17025_4385  histone family protein nucleoid-structuring protein H-NS  71.84 
 
 
105 aa  159  1e-38  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0118502  normal  0.891502 
 
 
-
 
NC_007489  RSP_4056  histone-like nucleoid-structuring protein H-NS  67.96 
 
 
105 aa  150  5e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4162  hypothetical protein  59.8 
 
 
247 aa  133  7.000000000000001e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1545  histone family protein nucleoid-structuring protein H-NS  56.31 
 
 
105 aa  117  7e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.718681  normal  0.0365604 
 
 
-
 
NC_009430  Rsph17025_4136  hypothetical protein  54.9 
 
 
132 aa  106  9.000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2782  histone family protein nucleoid-structuring protein H-NS  56.73 
 
 
102 aa  103  1e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.0983316  normal 
 
 
-
 
NC_008687  Pden_3349  histone family protein nucleoid-structuring protein H-NS  52.43 
 
 
105 aa  99.4  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.340557 
 
 
-
 
NC_007801  Jann_4229  histone-like nucleoid-structuring protein H-NS  47.52 
 
 
108 aa  98.6  3e-20  Jannaschia sp. CCS1  Bacteria  normal  0.289876  normal 
 
 
-
 
NC_007489  RSP_7372  H-NS family DNA-binding protein  47 
 
 
104 aa  95.5  2e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3156  histone family protein nucleoid-structuring protein H-NS  53.4 
 
 
105 aa  95.9  2e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.116532  normal  0.477373 
 
 
-
 
NC_007802  Jann_0798  histone-like nucleoid-structuring protein H-NS  45.54 
 
 
119 aa  88.6  3e-17  Jannaschia sp. CCS1  Bacteria  normal  0.835916  normal 
 
 
-
 
NC_008043  TM1040_3107  histone-like nucleoid-structuring protein H-NS  46.23 
 
 
106 aa  79  0.00000000000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1024  histone family protein nucleoid-structuring protein H-NS  38.1 
 
 
105 aa  79.3  0.00000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0737742  normal  0.814079 
 
 
-
 
NC_007298  Daro_2525  histone-like nucleoid-structuring protein H-NS  35.24 
 
 
105 aa  73.9  0.0000000000006  Dechloromonas aromatica RCB  Bacteria  decreased coverage  9.16284e-21  normal  0.0335348 
 
 
-
 
NC_008340  Mlg_1986  histone family protein nucleoid-structuring protein H-NS  35.58 
 
 
105 aa  72  0.000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  decreased coverage  0.000000114439  normal  0.0153833 
 
 
-
 
NC_007493  RSP_0002  histone-like nucleoid-structuring protein H-NS  35.9 
 
 
131 aa  69.7  0.00000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.0049965  n/a   
 
 
-
 
NC_013422  Hneap_0439  histone family protein nucleoid-structuring protein H-NS  34.62 
 
 
107 aa  67.8  0.00000000004  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000352276  n/a   
 
 
-
 
NC_007969  Pcryo_1957  histone-like nucleoid-structuring protein H-NS  34.62 
 
 
121 aa  65.9  0.0000000002  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00140882  normal 
 
 
-
 
NC_002977  MCA1863  regulator protein, putative  33.64 
 
 
112 aa  64.3  0.0000000005  Methylococcus capsulatus str. Bath  Bacteria  unclonable  0.0000000371113  n/a   
 
 
-
 
NC_007964  Nham_3068  histone-like nucleoid-structuring protein H-NS  35.14 
 
 
122 aa  62.4  0.000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.280777  n/a   
 
 
-
 
NC_008789  Hhal_1489  histone family protein nucleoid-structuring protein H-NS  34.51 
 
 
115 aa  61.2  0.000000005  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3069  histone-like nucleoid-structuring protein H-NS  33.94 
 
 
130 aa  58.9  0.00000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.39515  n/a   
 
 
-
 
NC_013421  Pecwa_1651  histone family protein nucleoid-structuring protein H-NS  33.02 
 
 
107 aa  58.9  0.00000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03185  DNA-binding protein  30.33 
 
 
153 aa  57.4  0.00000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0526  histone family protein nucleoid-structuring protein H-NS  32.26 
 
 
127 aa  57  0.00000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.280908 
 
 
-
 
NC_011071  Smal_3562  histone family protein nucleoid-structuring protein H-NS  32.76 
 
 
139 aa  54.7  0.0000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.626821  normal  0.684238 
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  35.16 
 
 
111 aa  53.1  0.000001  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_010513  Xfasm12_1793  DNA-binding protein  32.23 
 
 
124 aa  53.1  0.000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1726  histone family protein nucleoid-structuring protein H-NS  32.23 
 
 
124 aa  52.4  0.000002  Xylella fastidiosa M23  Bacteria  normal  0.442577  n/a   
 
 
-
 
NC_010681  Bphyt_0398  histone family protein nucleoid-structuring protein H-NS  40.23 
 
 
100 aa  51.6  0.000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  35.63 
 
 
100 aa  50.8  0.000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4321  putative HNS-like transcriptional regulator  39.08 
 
 
100 aa  50.4  0.000009  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  32.53 
 
 
99 aa  50.4  0.000009  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  35.64 
 
 
125 aa  49.7  0.00001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1152  histone family protein nucleoid-structuring protein H-NS  33.04 
 
 
133 aa  49.7  0.00001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  35.64 
 
 
97 aa  49.7  0.00001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  48.9  0.00002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4714  histone family protein nucleoid-structuring protein H-NS  32.32 
 
 
98 aa  49.3  0.00002  Delftia acidovorans SPH-1  Bacteria  normal  0.991534  normal  0.729946 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  48.9  0.00003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  48.9  0.00003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_008789  Hhal_0441  histone family protein nucleoid-structuring protein H-NS  29.67 
 
 
124 aa  48.5  0.00003  Halorhodospira halophila SL1  Bacteria  normal  0.940607  n/a   
 
 
-
 
NC_012912  Dd1591_2575  histone family protein nucleoid-structuring protein H-NS  32.14 
 
 
133 aa  48.5  0.00003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  48.9  0.00003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_010803  Clim_0519  histone family protein nucleoid-structuring protein H-NS  33.73 
 
 
97 aa  47.8  0.00005  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000291454  n/a   
 
 
-
 
NC_009428  Rsph17025_2688  hypothetical protein  30.1 
 
 
110 aa  47.4  0.00006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.299941  normal 
 
 
-
 
NC_008825  Mpe_A3165  putative HNS-like transcription regulator protein  37.25 
 
 
118 aa  47.4  0.00007  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00480481 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  47.4  0.00007  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  33.66 
 
 
97 aa  47  0.00009  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  33.66 
 
 
97 aa  47  0.00009  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  33.73 
 
 
96 aa  46.6  0.0001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2738  histone-like nucleoid-structuring protein H-NS  29.63 
 
 
139 aa  46.2  0.0002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.789792  normal 
 
 
-
 
NC_011148  SeAg_A0019  H-NS histone family  39.29 
 
 
141 aa  44.7  0.0004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  35.23 
 
 
100 aa  44.7  0.0004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_007435  BURPS1710b_A1239  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.0000000000958752  n/a   
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  30.68 
 
 
100 aa  44.3  0.0005  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_008784  BMASAVP1_1551  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia mallei SAVP1  Bacteria  unclonable  0.0000000000000358636  n/a   
 
 
-
 
NC_008835  BMA10229_1739  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000443719  n/a   
 
 
-
 
NC_009075  BURPS668_A3002  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000136233  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2886  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia pseudomallei 1106a  Bacteria  hitchhiker  0.000145694  n/a   
 
 
-
 
NC_009079  BMA10247_A0401  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0005  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000304691  n/a   
 
 
-
 
NC_007650  BTH_II2207  H-NS histone family protein  36.59 
 
 
96 aa  44.3  0.0006  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000000144624  n/a   
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  32.29 
 
 
91 aa  44.3  0.0006  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  30.68 
 
 
100 aa  43.9  0.0007  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  43.9  0.0007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2842  histone family protein nucleoid-structuring protein H-NS  30.36 
 
 
133 aa  43.9  0.0007  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00137778  n/a   
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  28.57 
 
 
102 aa  43.9  0.0008  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_006349  BMAA0365  H-NS histone family protein  35.8 
 
 
96 aa  43.5  0.0009  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.00000040716  n/a   
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  31.33 
 
 
96 aa  43.5  0.0009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_007650  BTH_II0843  DNA-binding protein BprA  39.66 
 
 
96 aa  43.5  0.001  Burkholderia thailandensis E264  Bacteria  normal  0.277711  n/a   
 
 
-
 
NC_008062  Bcen_5743  histone-like nucleoid-structuring protein H-NS  33.33 
 
 
109 aa  43.5  0.001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6107  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
109 aa  43.5  0.001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.525668  normal 
 
 
-
 
NC_008782  Ajs_1598  nucleoid protein H-NS  40.54 
 
 
117 aa  43.5  0.001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2911  hypothetical protein  28.16 
 
 
92 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  28.42 
 
 
97 aa  43.1  0.001  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010512  Bcenmc03_6589  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
109 aa  43.5  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.768318  normal  0.0573169 
 
 
-
 
NC_010622  Bphy_2172  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
108 aa  43.1  0.001  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00000970391 
 
 
-
 
NC_007435  BURPS1710b_A0208  H-NS histone family protein  33.98 
 
 
101 aa  42.4  0.002  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00707733  n/a   
 
 
-
 
NC_008781  Pnap_3493  histone family protein nucleoid-structuring protein H-NS  32.26 
 
 
113 aa  42.7  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.572012  normal  0.600215 
 
 
-
 
NC_009078  BURPS1106A_A1616  H-NS histone family protein  33.98 
 
 
101 aa  42.4  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3279  histone family protein nucleoid-structuring protein H-NS  40 
 
 
97 aa  42.7  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0515948 
 
 
-
 
NC_010524  Lcho_2742  histone family protein nucleoid-structuring protein H-NS  30.19 
 
 
123 aa  42.4  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000655544 
 
 
-
 
NC_009075  BURPS668_A0126  H-NS histone family protein  33.98 
 
 
101 aa  41.6  0.003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  31.76 
 
 
94 aa  42  0.003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1136  histone family protein nucleoid-structuring protein H-NS  29.29 
 
 
104 aa  42  0.003  Thauera sp. MZ1T  Bacteria  hitchhiker  0.00265311  n/a   
 
 
-
 
NC_010625  Bphy_6773  histone family protein nucleoid-structuring protein H-NS  32.47 
 
 
112 aa  41.6  0.003  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00017117  normal  0.0671695 
 
 
-
 
NC_010679  Bphyt_7403  histone family protein nucleoid-structuring protein H-NS  24.14 
 
 
96 aa  41.2  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  30.59 
 
 
96 aa  41.6  0.004  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_009092  Shew_2585  histone family protein nucleoid-structuring protein H-NS  26.36 
 
 
130 aa  41.6  0.004  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000212728  normal 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  30.59 
 
 
96 aa  41.6  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_006348  BMA0864  H-NS histone family protein  37.5 
 
 
93 aa  41.2  0.005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1386  H-NS histone family protein  37.5 
 
 
93 aa  41.2  0.005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
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