134 homologs were found in PanDaTox collection
for query gene Rsph17025_4385 on replicon NC_009432
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009432  Rsph17025_4385  histone family protein nucleoid-structuring protein H-NS  100 
 
 
105 aa  210  5.999999999999999e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0118502  normal  0.891502 
 
 
-
 
NC_007489  RSP_4056  histone-like nucleoid-structuring protein H-NS  67.62 
 
 
105 aa  151  2.9999999999999998e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2961  histone family protein nucleoid-structuring protein H-NS  73.79 
 
 
104 aa  149  1e-35  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0570093 
 
 
-
 
NC_007493  RSP_1517  HNS family histone-like protein  71.84 
 
 
104 aa  148  2e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.632748  n/a   
 
 
-
 
NC_009049  Rsph17029_0169  histone family protein nucleoid-structuring protein H-NS  71.84 
 
 
104 aa  148  2e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.485688 
 
 
-
 
NC_009430  Rsph17025_4162  hypothetical protein  69.61 
 
 
247 aa  149  2e-35  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4136  hypothetical protein  58.82 
 
 
132 aa  115  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1545  histone family protein nucleoid-structuring protein H-NS  51.43 
 
 
105 aa  106  9.000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  0.718681  normal  0.0365604 
 
 
-
 
NC_007489  RSP_7372  H-NS family DNA-binding protein  50.48 
 
 
104 aa  105  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2782  histone family protein nucleoid-structuring protein H-NS  51.96 
 
 
102 aa  96.3  1e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.0983316  normal 
 
 
-
 
NC_007801  Jann_4229  histone-like nucleoid-structuring protein H-NS  44.76 
 
 
108 aa  95.1  3e-19  Jannaschia sp. CCS1  Bacteria  normal  0.289876  normal 
 
 
-
 
NC_008687  Pden_3349  histone family protein nucleoid-structuring protein H-NS  49.52 
 
 
105 aa  94.4  5e-19  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.340557 
 
 
-
 
NC_007802  Jann_0798  histone-like nucleoid-structuring protein H-NS  45.54 
 
 
119 aa  91.7  3e-18  Jannaschia sp. CCS1  Bacteria  normal  0.835916  normal 
 
 
-
 
NC_008687  Pden_3156  histone family protein nucleoid-structuring protein H-NS  49.52 
 
 
105 aa  87.8  4e-17  Paracoccus denitrificans PD1222  Bacteria  normal  0.116532  normal  0.477373 
 
 
-
 
NC_009952  Dshi_1024  histone family protein nucleoid-structuring protein H-NS  43.16 
 
 
105 aa  81.3  0.000000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0737742  normal  0.814079 
 
 
-
 
NC_013422  Hneap_0439  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
107 aa  73.6  0.0000000000009  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000352276  n/a   
 
 
-
 
NC_008340  Mlg_1986  histone family protein nucleoid-structuring protein H-NS  39.42 
 
 
105 aa  73.6  0.000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  decreased coverage  0.000000114439  normal  0.0153833 
 
 
-
 
NC_007969  Pcryo_1957  histone-like nucleoid-structuring protein H-NS  35.58 
 
 
121 aa  66.2  0.0000000001  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00140882  normal 
 
 
-
 
NC_007493  RSP_0002  histone-like nucleoid-structuring protein H-NS  35.78 
 
 
131 aa  63.9  0.0000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.0049965  n/a   
 
 
-
 
NC_007298  Daro_2525  histone-like nucleoid-structuring protein H-NS  34.29 
 
 
105 aa  62.4  0.000000002  Dechloromonas aromatica RCB  Bacteria  decreased coverage  9.16284e-21  normal  0.0335348 
 
 
-
 
NC_008043  TM1040_3107  histone-like nucleoid-structuring protein H-NS  41.35 
 
 
106 aa  62  0.000000003  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1489  histone family protein nucleoid-structuring protein H-NS  34.21 
 
 
115 aa  58.9  0.00000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1651  histone family protein nucleoid-structuring protein H-NS  53.49 
 
 
107 aa  58.5  0.00000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3069  histone-like nucleoid-structuring protein H-NS  31.19 
 
 
130 aa  57  0.00000008  Nitrobacter hamburgensis X14  Bacteria  normal  0.39515  n/a   
 
 
-
 
NC_011071  Smal_0526  histone family protein nucleoid-structuring protein H-NS  33.61 
 
 
127 aa  53.9  0.0000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.280908 
 
 
-
 
NC_010717  PXO_03185  DNA-binding protein  29.75 
 
 
153 aa  53.5  0.0000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3068  histone-like nucleoid-structuring protein H-NS  29.46 
 
 
122 aa  53.5  0.000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.280777  n/a   
 
 
-
 
NC_002977  MCA1863  regulator protein, putative  28.04 
 
 
112 aa  52.8  0.000002  Methylococcus capsulatus str. Bath  Bacteria  unclonable  0.0000000371113  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  37.62 
 
 
125 aa  51.6  0.000003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  37.62 
 
 
97 aa  51.6  0.000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  36.78 
 
 
100 aa  50.8  0.000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  35.29 
 
 
97 aa  50.8  0.000006  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  35.29 
 
 
97 aa  50.4  0.000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  50.8  0.000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  35.29 
 
 
97 aa  50.4  0.000007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  34.65 
 
 
97 aa  50.8  0.000007  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  35.29 
 
 
97 aa  50.4  0.000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_011071  Smal_3562  histone family protein nucleoid-structuring protein H-NS  32.46 
 
 
139 aa  50.1  0.000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.626821  normal  0.684238 
 
 
-
 
NC_010577  XfasM23_1726  histone family protein nucleoid-structuring protein H-NS  42.22 
 
 
124 aa  49.7  0.00001  Xylella fastidiosa M23  Bacteria  normal  0.442577  n/a   
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  32.08 
 
 
111 aa  49.7  0.00001  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_008782  Ajs_1598  nucleoid protein H-NS  41.25 
 
 
117 aa  50.1  0.00001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0519  histone family protein nucleoid-structuring protein H-NS  31.31 
 
 
97 aa  50.1  0.00001  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000291454  n/a   
 
 
-
 
NC_010513  Xfasm12_1793  DNA-binding protein  28.33 
 
 
124 aa  50.1  0.00001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010679  Bphyt_7403  histone family protein nucleoid-structuring protein H-NS  30.39 
 
 
96 aa  50.1  0.00001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
119 aa  49.3  0.00002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  32.93 
 
 
99 aa  48.9  0.00002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  35.29 
 
 
97 aa  48.9  0.00002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_008577  Shewana3_1404  histone family protein nucleoid-structuring protein H-NS  29.09 
 
 
130 aa  48.5  0.00003  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000773951  normal  0.9865 
 
 
-
 
NC_008321  Shewmr4_1351  histone family protein nucleoid-structuring protein H-NS  29.09 
 
 
130 aa  48.1  0.00004  Shewanella sp. MR-4  Bacteria  normal  0.0110439  hitchhiker  0.00767889 
 
 
-
 
NC_008322  Shewmr7_1416  histone family protein nucleoid-structuring protein H-NS  29.09 
 
 
130 aa  48.1  0.00004  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00233677  normal  0.422691 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  37.35 
 
 
100 aa  47.8  0.00005  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  37.35 
 
 
100 aa  47.4  0.00006  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_004347  SO_3146  H-NS family DNA-binding protein  29.25 
 
 
130 aa  47  0.00008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  35.48 
 
 
102 aa  47  0.00008  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  33.73 
 
 
96 aa  46.6  0.0001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  34.29 
 
 
114 aa  46.2  0.0001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1444  histone family protein nucleoid-structuring protein H-NS  29.46 
 
 
130 aa  46.6  0.0001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.292783  normal 
 
 
-
 
NC_010002  Daci_3717  histone family protein nucleoid-structuring protein H-NS  36.14 
 
 
136 aa  46.6  0.0001  Delftia acidovorans SPH-1  Bacteria  normal  0.989758  hitchhiker  0.00118334 
 
 
-
 
NC_007650  BTH_II0843  DNA-binding protein BprA  33.33 
 
 
96 aa  45.8  0.0002  Burkholderia thailandensis E264  Bacteria  normal  0.277711  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  34.95 
 
 
96 aa  45.4  0.0002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011148  SeAg_A0019  H-NS histone family  41.54 
 
 
141 aa  45.8  0.0002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  n/a    n/a   
 
 
-
 
NC_007650  BTH_II2010  H-NS histone family protein  36.99 
 
 
99 aa  45.4  0.0003  Burkholderia thailandensis E264  Bacteria  normal  0.0227527  n/a   
 
 
-
 
NC_007958  RPD_2738  histone-like nucleoid-structuring protein H-NS  28.32 
 
 
139 aa  45.4  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.789792  normal 
 
 
-
 
NC_008392  Bamb_6089  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
109 aa  45.4  0.0003  Burkholderia ambifaria AMMD  Bacteria  normal  0.817977  normal 
 
 
-
 
NC_010557  BamMC406_5851  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
109 aa  45.4  0.0003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2911  hypothetical protein  52.94 
 
 
92 aa  45.4  0.0003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  35.71 
 
 
95 aa  45.1  0.0004  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010681  Bphyt_0398  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
100 aa  44.7  0.0004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  34.38 
 
 
91 aa  44.3  0.0005  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_009438  Sputcn32_2512  histone family protein nucleoid-structuring protein H-NS  26.36 
 
 
130 aa  43.9  0.0007  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00123836  n/a   
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  32.67 
 
 
96 aa  43.9  0.0008  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_007951  Bxe_A4321  putative HNS-like transcriptional regulator  33.33 
 
 
100 aa  43.9  0.0008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  32.67 
 
 
96 aa  43.9  0.0008  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_011663  Sbal223_1510  histone family protein nucleoid-structuring protein H-NS  31.51 
 
 
130 aa  43.1  0.001  Shewanella baltica OS223  Bacteria  decreased coverage  0.000161891  normal 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  31.25 
 
 
102 aa  43.5  0.001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_008062  Bcen_5743  histone-like nucleoid-structuring protein H-NS  34.12 
 
 
109 aa  43.1  0.001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6107  histone family protein nucleoid-structuring protein H-NS  34.12 
 
 
109 aa  43.1  0.001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.525668  normal 
 
 
-
 
NC_008789  Hhal_0441  histone family protein nucleoid-structuring protein H-NS  32.48 
 
 
124 aa  43.1  0.001  Halorhodospira halophila SL1  Bacteria  normal  0.940607  n/a   
 
 
-
 
NC_008825  Mpe_A3165  putative HNS-like transcription regulator protein  31.37 
 
 
118 aa  43.1  0.001  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00480481 
 
 
-
 
NC_009052  Sbal_2848  histone family protein nucleoid-structuring protein H-NS  31.51 
 
 
130 aa  43.1  0.001  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000899352  n/a   
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  34.52 
 
 
95 aa  42.7  0.001  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_009428  Rsph17025_2688  hypothetical protein  47.06 
 
 
110 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.299941  normal 
 
 
-
 
NC_009665  Shew185_2867  histone family protein nucleoid-structuring protein H-NS  31.51 
 
 
130 aa  43.1  0.001  Shewanella baltica OS185  Bacteria  hitchhiker  0.00308675  n/a   
 
 
-
 
NC_009901  Spea_2856  histone family protein nucleoid-structuring protein H-NS  28.18 
 
 
130 aa  43.1  0.001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2996  histone family protein nucleoid-structuring protein H-NS  31.51 
 
 
130 aa  43.1  0.001  Shewanella baltica OS195  Bacteria  normal  0.18601  normal 
 
 
-
 
NC_010512  Bcenmc03_6589  histone family protein nucleoid-structuring protein H-NS  34.12 
 
 
109 aa  43.1  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.768318  normal  0.0573169 
 
 
-
 
NC_007509  Bcep18194_C7579  histone-like nucleoid-structuring protein H-NS  33.33 
 
 
109 aa  42.4  0.002  Burkholderia sp. 383  Bacteria  normal  0.54905  normal 
 
 
-
 
NC_011662  Tmz1t_1136  histone family protein nucleoid-structuring protein H-NS  26.26 
 
 
104 aa  42.4  0.002  Thauera sp. MZ1T  Bacteria  hitchhiker  0.00265311  n/a   
 
 
-
 
NC_011353  ECH74115_5080  Ler  37.7 
 
 
123 aa  42.4  0.002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0343561 
 
 
-
 
NC_010524  Lcho_2742  histone family protein nucleoid-structuring protein H-NS  30.56 
 
 
123 aa  42.7  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000655544 
 
 
-
 
NC_010087  Bmul_6044  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
116 aa  42.7  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.304642 
 
 
-
 
NC_010506  Swoo_3237  histone family protein nucleoid-structuring protein H-NS  28.97 
 
 
131 aa  42.7  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.602482 
 
 
-
 
NC_013456  VEA_003852  DNA-binding protein H-NS  43.48 
 
 
135 aa  42  0.003  Vibrio sp. Ex25  Bacteria  normal  0.0195644  n/a   
 
 
-
 
NC_009783  VIBHAR_01827  hypothetical protein  40.35 
 
 
135 aa  42  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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