19 homologs were found in PanDaTox collection
for query gene Rsph17025_4375 on replicon NC_009432
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009432  Rsph17025_4375  type IV secretion system family protein  100 
 
 
239 aa  477  1e-134  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.669124 
 
 
-
 
NC_009667  Oant_0678  P-type DNA transfer protein VirB5  33.93 
 
 
232 aa  118  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.511281  n/a   
 
 
-
 
NC_008242  Meso_4345  type IV secretion system  35.14 
 
 
231 aa  103  2e-21  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009717  Xaut_5085  P-type DNA transfer protein VirB5  35.64 
 
 
231 aa  84  0.000000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.997151 
 
 
-
 
NC_009475  BBta_p0254  Type IV secretory pathway AvhB5 protein  33.53 
 
 
240 aa  83.2  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0531  type IV secretion system protein, putative  28.45 
 
 
254 aa  71.2  0.00000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009508  Swit_5006  type IV secretion system family protein  28.25 
 
 
238 aa  66.6  0.0000000003  Sphingomonas wittichii RW1  Bacteria  decreased coverage  0.000746811  normal  0.254693 
 
 
-
 
NC_011891  A2cp1_1139  P-type DNA transfer protein VirB5  28.93 
 
 
231 aa  64.7  0.000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010509  Mrad2831_6326  P-type DNA transfer protein VirB5  25.59 
 
 
236 aa  64.3  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_004311  BRA0065  type IV secretion system protein VirB5  25.22 
 
 
238 aa  60.8  0.00000002  Brucella suis 1330  Bacteria  normal  0.0500304  n/a   
 
 
-
 
NC_009504  BOV_A0059  P-type DNA transfer protein VirB5  24.35 
 
 
238 aa  54.7  0.000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0452  putative type IV secretion system protein VirB5/TraF  23.3 
 
 
235 aa  51.2  0.00002  Burkholderia xenovorans LB400  Bacteria  normal  0.385252  normal 
 
 
-
 
NC_007951  Bxe_A1758  putative type IV secretion system protein VirB5/TraF  25.36 
 
 
231 aa  50.1  0.00003  Burkholderia xenovorans LB400  Bacteria  normal  0.291545  normal  0.256118 
 
 
-
 
NC_010676  Bphyt_6502  P-type DNA transfer protein VirB5  24.88 
 
 
231 aa  49.3  0.00005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5817  type IV secretion system family protein  25.35 
 
 
244 aa  49.3  0.00005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0165  P-type DNA transfer protein VirB5  23.61 
 
 
236 aa  48.9  0.00007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.572956 
 
 
-
 
NC_007951  Bxe_A2653  putative type IV secretion system protein VirB5/TraF  25.12 
 
 
237 aa  47.8  0.0001  Burkholderia xenovorans LB400  Bacteria  normal  0.0243741  normal 
 
 
-
 
NC_010627  Bphy_7533  type IV secretion system family protein  26.89 
 
 
225 aa  48.5  0.0001  Burkholderia phymatum STM815  Bacteria  normal  0.0210387  normal  0.0576761 
 
 
-
 
NC_009777  VIBHAR_p08212  conjugal transfer protein TrbJ  23.18 
 
 
221 aa  44.3  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  normal  n/a   
 
 
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