More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_2728 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1284  acyl-CoA dehydrogenase domain protein  76.38 
 
 
404 aa  636    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2728  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
403 aa  826    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.335629  normal  0.940576 
 
 
-
 
NC_004310  BR1085  glutaryl-CoA dehydrogenase  78.15 
 
 
394 aa  637    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2170  acyl-CoA dehydrogenase domain-containing protein  78.15 
 
 
394 aa  636    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0822  acyl-CoA dehydrogenase domain-containing protein  78.52 
 
 
394 aa  644    Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2357  acyl-CoA dehydrogenase  80.75 
 
 
406 aa  671    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4671  acyl-CoA dehydrogenase domain-containing protein  81.28 
 
 
395 aa  662    Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.0018836  normal  0.0173504 
 
 
-
 
NC_007493  RSP_1295  putative acyl-CoA dehydrogenase  96.77 
 
 
403 aa  801    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2451  glutaryl-CoA dehydrogenase  78.45 
 
 
404 aa  650    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1162  Acyl-CoA dehydrogenase-like  76.63 
 
 
404 aa  634    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0873897  normal  0.0990997 
 
 
-
 
NC_007802  Jann_2813  acyl-CoA dehydrogenase-like  78.93 
 
 
404 aa  658    Jannaschia sp. CCS1  Bacteria  normal  0.207157  normal 
 
 
-
 
NC_007802  Jann_3069  acyl-CoA dehydrogenase-like  81.09 
 
 
404 aa  692    Jannaschia sp. CCS1  Bacteria  normal  0.66075  normal  0.0926601 
 
 
-
 
NC_007925  RPC_4297  acyl-CoA dehydrogenase-like  76.88 
 
 
404 aa  636    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.296437  normal  0.0883749 
 
 
-
 
NC_007958  RPD_1264  acyl-CoA dehydrogenase-like  76.88 
 
 
404 aa  640    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.51833  normal  0.675418 
 
 
-
 
NC_008044  TM1040_1255  acyl-CoA dehydrogenase-like  84.25 
 
 
407 aa  675    Ruegeria sp. TM1040  Bacteria  normal  0.229688  normal 
 
 
-
 
NC_008347  Mmar10_1661  acyl-CoA dehydrogenase domain-containing protein  82.75 
 
 
406 aa  697    Maricaulis maris MCS10  Bacteria  normal  0.0842003  normal  0.909495 
 
 
-
 
NC_009049  Rsph17029_2955  acyl-CoA dehydrogenase domain-containing protein  97.02 
 
 
403 aa  804    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0522083  normal 
 
 
-
 
NC_008254  Meso_2481  acyl-CoA dehydrogenase-like  79.69 
 
 
406 aa  633  1e-180  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4412  acyl-CoA dehydrogenase domain-containing protein  79.38 
 
 
403 aa  631  1e-180  Paracoccus denitrificans PD1222  Bacteria  normal  0.620152  normal  0.546759 
 
 
-
 
NC_009511  Swit_4233  acyl-CoA dehydrogenase domain-containing protein  77.49 
 
 
394 aa  628  1e-179  Sphingomonas wittichii RW1  Bacteria  normal  0.0274104  normal 
 
 
-
 
NC_007964  Nham_0753  acyl-CoA dehydrogenase-like  76.13 
 
 
404 aa  628  1e-179  Nitrobacter hamburgensis X14  Bacteria  normal  0.202646  n/a   
 
 
-
 
NC_010511  M446_1649  acyl-CoA dehydrogenase domain-containing protein  77.75 
 
 
415 aa  628  1e-179  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.246483 
 
 
-
 
NC_011894  Mnod_1268  acyl-CoA dehydrogenase domain protein  76.98 
 
 
413 aa  626  1e-178  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.831834  n/a   
 
 
-
 
NC_007406  Nwi_0608  acyl-CoA dehydrogenase  74.12 
 
 
404 aa  622  1e-177  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3419  acyl-CoA dehydrogenase domain-containing protein  77.38 
 
 
394 aa  622  1e-177  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0350417  n/a   
 
 
-
 
NC_010505  Mrad2831_5095  acyl-CoA dehydrogenase domain-containing protein  75.9 
 
 
409 aa  619  1e-176  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.124298  normal  0.0779135 
 
 
-
 
NC_011988  Avi_5908  glutaryl-CoA dehydrogenase  77.12 
 
 
391 aa  610  1e-173  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2879  acyl-CoA dehydrogenase-like protein  73.45 
 
 
400 aa  597  1e-170  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4712  acyl-CoA dehydrogenase domain-containing protein  73.01 
 
 
397 aa  595  1e-169  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.145534 
 
 
-
 
NC_013440  Hoch_4889  acyl-CoA dehydrogenase domain protein  72.75 
 
 
392 aa  588  1e-167  Haliangium ochraceum DSM 14365  Bacteria  normal  0.378984  normal  0.687816 
 
 
-
 
NC_007954  Sden_3018  acyl-CoA dehydrogenase-like protein  71.47 
 
 
391 aa  575  1.0000000000000001e-163  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0900  acyl-CoA dehydrogenase domain-containing protein  70.95 
 
 
391 aa  572  1.0000000000000001e-162  Shewanella loihica PV-4  Bacteria  normal  normal  0.461251 
 
 
-
 
NC_009379  Pnuc_0818  acyl-CoA dehydrogenase domain-containing protein  71.39 
 
 
392 aa  569  1e-161  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.559131  n/a   
 
 
-
 
NC_007204  Psyc_0805  putative glutaryl-CoA dehydrogenase  69.74 
 
 
394 aa  569  1e-161  Psychrobacter arcticus 273-4  Bacteria  normal  0.75963  normal  0.310028 
 
 
-
 
NC_008700  Sama_2796  acyl-CoA dehydrogenase-like protein  70.95 
 
 
391 aa  569  1e-161  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0815  glutaryl-CoA dehydrogenase  69.74 
 
 
394 aa  567  1e-160  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.991169 
 
 
-
 
NC_003910  CPS_4667  glutaryl-CoA dehydrogenase  69.85 
 
 
394 aa  561  1.0000000000000001e-159  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0782  acyl-CoA dehydrogenase domain-containing protein  69.49 
 
 
395 aa  564  1.0000000000000001e-159  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.61313  normal 
 
 
-
 
NC_007492  Pfl01_0117  Acyl-CoA dehydrogenase-like  70.18 
 
 
393 aa  562  1.0000000000000001e-159  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0899419  normal 
 
 
-
 
NC_007510  Bcep18194_A3906  Acyl-CoA dehydrogenase-like  69.23 
 
 
395 aa  561  1.0000000000000001e-159  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0330  acyl-CoA dehydrogenase-like  69.23 
 
 
395 aa  563  1.0000000000000001e-159  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2438  acyl-CoA dehydrogenase domain-containing protein  69.05 
 
 
396 aa  562  1.0000000000000001e-159  Burkholderia phymatum STM815  Bacteria  normal  0.269814  normal 
 
 
-
 
NC_010084  Bmul_2570  acyl-CoA dehydrogenase domain-containing protein  69.23 
 
 
395 aa  561  1.0000000000000001e-159  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.216949  normal 
 
 
-
 
NC_010506  Swoo_1033  acyl-CoA dehydrogenase domain-containing protein  69.59 
 
 
391 aa  563  1.0000000000000001e-159  Shewanella woodyi ATCC 51908  Bacteria  normal  0.355643  normal 
 
 
-
 
NC_008390  Bamb_0694  acyl-CoA dehydrogenase domain-containing protein  69.23 
 
 
395 aa  561  1.0000000000000001e-159  Burkholderia ambifaria AMMD  Bacteria  normal  0.324229  n/a   
 
 
-
 
NC_010551  BamMC406_0711  acyl-CoA dehydrogenase domain-containing protein  69.49 
 
 
395 aa  562  1.0000000000000001e-159  Burkholderia ambifaria MC40-6  Bacteria  normal  0.245364  normal 
 
 
-
 
NC_008542  Bcen2424_0813  acyl-CoA dehydrogenase domain-containing protein  69.23 
 
 
395 aa  563  1.0000000000000001e-159  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0158  acyl-CoA dehydrogenase domain-containing protein  69.41 
 
 
393 aa  560  1e-158  Pseudomonas putida KT2440  Bacteria  normal  0.276992  hitchhiker  0.0000982042 
 
 
-
 
NC_009524  PsycPRwf_1536  acyl-CoA dehydrogenase domain-containing protein  69.85 
 
 
398 aa  558  1e-158  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0756  glutaryl-CoA dehydrogenase oxidoreductase  68.54 
 
 
435 aa  558  1e-158  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.366151 
 
 
-
 
NC_009831  Ssed_0984  acyl-CoA dehydrogenase domain-containing protein  68.81 
 
 
391 aa  559  1e-158  Shewanella sediminis HAW-EB3  Bacteria  normal  0.374892  normal 
 
 
-
 
NC_008781  Pnap_1133  acyl-CoA dehydrogenase domain-containing protein  68.94 
 
 
398 aa  559  1e-158  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0805  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  68.29 
 
 
397 aa  557  1e-158  Ralstonia eutropha JMP134  Bacteria  normal  0.268381  n/a   
 
 
-
 
NC_007643  Rru_A2005  glutaryl-CoA dehydrogenase  70.88 
 
 
395 aa  558  1e-158  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.518246  n/a   
 
 
-
 
NC_007973  Rmet_2653  acyl-CoA dehydrogenase-like protein  68.8 
 
 
397 aa  560  1e-158  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0177  acyl-CoA dehydrogenase domain-containing protein  69.41 
 
 
393 aa  560  1e-158  Pseudomonas putida F1  Bacteria  hitchhiker  0.00130576  normal  0.936713 
 
 
-
 
NC_011662  Tmz1t_0419  acyl-CoA dehydrogenase domain protein  68.53 
 
 
395 aa  560  1e-158  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_5068  acyl-CoA dehydrogenase domain-containing protein  69.15 
 
 
393 aa  559  1e-158  Pseudomonas putida W619  Bacteria  hitchhiker  0.000324963  normal  0.0231586 
 
 
-
 
NC_010682  Rpic_0706  acyl-CoA dehydrogenase domain protein  68.54 
 
 
397 aa  560  1e-158  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0783515 
 
 
-
 
NC_012856  Rpic12D_0772  acyl-CoA dehydrogenase domain protein  67.77 
 
 
397 aa  556  1e-157  Ralstonia pickettii 12D  Bacteria  normal  0.268888  normal  0.15145 
 
 
-
 
NC_006348  BMA2064  glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3237  glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3185  putative glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  556  1e-157  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3222  putative glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0230126  n/a   
 
 
-
 
NC_010322  PputGB1_0175  acyl-CoA dehydrogenase domain-containing protein  68.89 
 
 
393 aa  557  1e-157  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000000017739  normal  0.388373 
 
 
-
 
NC_007951  Bxe_A3904  putative glutaryl-CoA dehydrogenase  68.8 
 
 
396 aa  556  1e-157  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.107167 
 
 
-
 
NC_008740  Maqu_3322  acyl-CoA dehydrogenase domain-containing protein  69.41 
 
 
393 aa  556  1e-157  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0845  glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2678  glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1931  putative glutaryl-CoA dehydrogenase  68.97 
 
 
395 aa  555  1e-157  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1734  acyl-CoA dehydrogenase domain-containing protein  69.57 
 
 
398 aa  551  1e-156  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.177428 
 
 
-
 
NC_007005  Psyr_5014  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  68.38 
 
 
393 aa  552  1e-156  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.905782  normal  0.169624 
 
 
-
 
NC_008825  Mpe_A3170  glutaryl-CoA dehydrogenase  68.04 
 
 
422 aa  551  1e-156  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.129371 
 
 
-
 
NC_010002  Daci_2207  acyl-CoA dehydrogenase domain-containing protein  67.26 
 
 
398 aa  551  1e-156  Delftia acidovorans SPH-1  Bacteria  normal  0.312955  normal  0.110735 
 
 
-
 
NC_008752  Aave_1982  acyl-CoA dehydrogenase domain-containing protein  68.8 
 
 
399 aa  553  1e-156  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0500873  hitchhiker  0.0048757 
 
 
-
 
NC_012791  Vapar_0118  acyl-CoA dehydrogenase domain protein  68.62 
 
 
399 aa  554  1e-156  Variovorax paradoxus S110  Bacteria  normal  0.360682  n/a   
 
 
-
 
NC_009656  PSPA7_0549  glutaryl-CoA dehydrogenase  68.64 
 
 
393 aa  552  1e-156  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0776  acyl-CoA dehydrogenase domain protein  68.29 
 
 
396 aa  553  1e-156  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.567358 
 
 
-
 
NC_008463  PA14_05840  glutaryl-CoA dehydrogenase  68.64 
 
 
393 aa  553  1e-156  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2407  acyl-CoA dehydrogenase domain protein  68.03 
 
 
398 aa  549  1e-155  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2130  acyl-CoA dehydrogenase domain-containing protein  68.38 
 
 
394 aa  548  1e-155  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0270955 
 
 
-
 
NC_007298  Daro_0539  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  66.75 
 
 
391 aa  548  1e-155  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1671  acyl-CoA dehydrogenase-like  67.93 
 
 
398 aa  548  1e-155  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2979  acyl-CoA dehydrogenase domain-containing protein  68.03 
 
 
398 aa  550  1e-155  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5461  acyl-CoA dehydrogenase, putative  68.38 
 
 
393 aa  546  1e-154  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.119164  n/a   
 
 
-
 
NC_009439  Pmen_4429  acyl-CoA dehydrogenase domain-containing protein  67.87 
 
 
392 aa  546  1e-154  Pseudomonas mendocina ymp  Bacteria  normal  0.0167364  normal  0.43046 
 
 
-
 
NC_011366  Rleg2_5829  acyl-CoA dehydrogenase domain protein  68.56 
 
 
395 aa  545  1e-154  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.628432  normal 
 
 
-
 
NC_012560  Avin_24930  Glutaryl-CoA dehydrogenase  67.61 
 
 
395 aa  541  1e-153  Azotobacter vinelandii DJ  Bacteria  normal  0.440339  n/a   
 
 
-
 
NC_009719  Plav_0821  acyl-CoA dehydrogenase domain-containing protein  65.99 
 
 
409 aa  543  1e-153  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.384147  normal  0.990129 
 
 
-
 
NC_012858  Rleg_6742  acyl-CoA dehydrogenase domain protein  68.3 
 
 
395 aa  542  1e-153  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.224399  normal 
 
 
-
 
NC_007651  BTH_I1390  glutaryl-CoA dehydrogenase  69.49 
 
 
395 aa  540  9.999999999999999e-153  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4070  acyl-CoA dehydrogenase-like  67.01 
 
 
398 aa  541  9.999999999999999e-153  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1037  acyl-CoA dehydrogenase-like  67.18 
 
 
396 aa  538  9.999999999999999e-153  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1193  acyl-CoA dehydrogenase domain-containing protein  68.3 
 
 
394 aa  531  1e-150  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_0857  acyl-CoA dehydrogenase domain-containing protein  65.98 
 
 
408 aa  533  1e-150  Acidiphilium cryptum JF-5  Bacteria  hitchhiker  0.00258655  n/a   
 
 
-
 
NC_008228  Patl_3993  glutaryl-CoA dehydrogenase  63.92 
 
 
394 aa  526  1e-148  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011671  PHATR_25572  predicted protein  60.77 
 
 
470 aa  484  1e-136  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_006692  CNG03020  Glutaryl-CoA dehydrogenase, mitochondrial precursor, putative  60.05 
 
 
426 aa  480  1e-134  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.388117  n/a   
 
 
-
 
NC_013501  Rmar_1436  acyl-CoA dehydrogenase domain protein  59.34 
 
 
415 aa  471  1e-132  Rhodothermus marinus DSM 4252  Bacteria  normal  0.549354  n/a   
 
 
-
 
NC_010531  Pnec_1021  acyl-CoA dehydrogenase domain protein  68.71 
 
 
347 aa  427  1e-118  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.364823  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>