16 homologs were found in PanDaTox collection
for query gene Rsph17025_1935 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1935  hypothetical protein  100 
 
 
197 aa  394  1e-109  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2588  hypothetical protein  83.25 
 
 
197 aa  339  2e-92  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1246  hypothetical protein  82.74 
 
 
197 aa  335  1.9999999999999998e-91  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.137122  normal 
 
 
-
 
NC_008686  Pden_0031  hypothetical protein  59.89 
 
 
196 aa  191  6e-48  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3947  hypothetical protein  48.39 
 
 
212 aa  177  7e-44  Sinorhizobium medicae WSM419  Bacteria  normal  0.0213585  normal 
 
 
-
 
NC_009952  Dshi_0472  hypothetical protein  43.01 
 
 
204 aa  146  2.0000000000000003e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5007  hypothetical protein  37.08 
 
 
202 aa  130  2.0000000000000002e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.536268  normal  0.174811 
 
 
-
 
NC_011894  Mnod_5311  hypothetical protein  37.29 
 
 
201 aa  125  3e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0024  hypothetical protein  37.7 
 
 
212 aa  122  5e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.767481 
 
 
-
 
NC_010725  Mpop_1803  hypothetical protein  36.18 
 
 
209 aa  115  3.9999999999999997e-25  Methylobacterium populi BJ001  Bacteria  normal  0.0310445  normal  0.397066 
 
 
-
 
NC_010172  Mext_1852  hypothetical protein  35.68 
 
 
209 aa  113  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2187  hypothetical protein  35.68 
 
 
209 aa  113  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.17078 
 
 
-
 
NC_009485  BBta_5949  hypothetical protein  31.25 
 
 
204 aa  108  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.272286  normal 
 
 
-
 
NC_010505  Mrad2831_2715  hypothetical protein  34.57 
 
 
212 aa  102  4e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.700746  normal  0.187677 
 
 
-
 
NC_011666  Msil_1584  hypothetical protein  35.48 
 
 
227 aa  97.1  2e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.224365 
 
 
-
 
NC_007925  RPC_0250  hypothetical protein  33.94 
 
 
127 aa  57.8  0.0000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.66839  normal  0.167361 
 
 
-
 
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