12 homologs were found in PanDaTox collection
for query gene Rsph17025_0672 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_0672  hypothetical protein  100 
 
 
76 aa  152  2e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.348568  decreased coverage  0.00306948 
 
 
-
 
NC_007493  RSP_6024  hypothetical protein  86.67 
 
 
76 aa  116  7.999999999999999e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0537  hypothetical protein  86.67 
 
 
76 aa  116  7.999999999999999e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2778  hypothetical protein  44.62 
 
 
72 aa  50.8  0.000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_007802  Jann_1229  hypothetical protein  39.19 
 
 
92 aa  47.8  0.00005  Jannaschia sp. CCS1  Bacteria  normal  0.288356  normal  0.563347 
 
 
-
 
NC_009428  Rsph17025_2174  hypothetical protein  57.14 
 
 
74 aa  45.1  0.0003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.181465  normal 
 
 
-
 
NC_007493  RSP_0019  hypothetical protein  55.88 
 
 
75 aa  43.5  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1648  hypothetical protein  55.88 
 
 
75 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.500303 
 
 
-
 
NC_008044  TM1040_1912  hypothetical protein  39.22 
 
 
70 aa  41.6  0.004  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1502  hypothetical protein  43.64 
 
 
80 aa  41.6  0.004  Sinorhizobium medicae WSM419  Bacteria  normal  0.61726  normal  0.0704083 
 
 
-
 
NC_007005  Psyr_3623  hypothetical protein  39.66 
 
 
77 aa  41.2  0.005  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.0092253  normal  0.259405 
 
 
-
 
NC_009439  Pmen_2134  hypothetical protein  55.56 
 
 
74 aa  40.8  0.006  Pseudomonas mendocina ymp  Bacteria  normal  0.0234086  normal  0.262679 
 
 
-
 
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