More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_0263 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_0263  response regulator receiver protein  100 
 
 
121 aa  251  3e-66  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.419062 
 
 
-
 
NC_007493  RSP_1583  chemotaxis response regulator, CheY3  90.91 
 
 
121 aa  234  3e-61  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.00144899  n/a   
 
 
-
 
NC_009049  Rsph17029_0235  response regulator receiver protein  90.91 
 
 
121 aa  234  3e-61  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3298  hypothetical protein  80.99 
 
 
121 aa  211  2.9999999999999995e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.244169  normal  0.765394 
 
 
-
 
NC_009050  Rsph17029_4035  response regulator receiver protein  80.99 
 
 
121 aa  208  3e-53  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.52498  normal 
 
 
-
 
NC_007494  RSP_3302  chemotaxis response regulator, CheY4  80.99 
 
 
121 aa  207  4e-53  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.930651  n/a   
 
 
-
 
NC_007493  RSP_2443  putative chemotaxis response regulator, CheY5  70.25 
 
 
122 aa  180  7e-45  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.451762  n/a   
 
 
-
 
NC_009049  Rsph17029_1107  response regulator receiver protein  70.25 
 
 
122 aa  180  7e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.91502 
 
 
-
 
NC_009428  Rsph17025_1787  response regulator receiver protein  69.42 
 
 
122 aa  176  8e-44  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0725  response regulator receiver  55.37 
 
 
121 aa  145  1.0000000000000001e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.537285 
 
 
-
 
NC_009656  PSPA7_0259  putative two-component response regulator  58.33 
 
 
121 aa  145  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.40567  n/a   
 
 
-
 
NC_008463  PA14_02260  putative two-component response regulator  58.33 
 
 
121 aa  144  4.0000000000000006e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.797803  normal 
 
 
-
 
NC_007643  Rru_A1398  response regulator receiver domain-containing protein  57.02 
 
 
123 aa  143  7.0000000000000006e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503734  n/a   
 
 
-
 
NC_008782  Ajs_3791  response regulator receiver protein  55.08 
 
 
120 aa  143  9e-34  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3065  response regulator receiver protein  55.08 
 
 
120 aa  143  9e-34  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4379  response regulator receiver protein  55.08 
 
 
120 aa  142  1e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2177  response regulator receiver protein  57.26 
 
 
120 aa  142  1e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0566  response regulator receiver domain-containing protein  58.62 
 
 
120 aa  143  1e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1289  chemotaxis protein CheY  52.89 
 
 
121 aa  142  2e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0584  chemotaxis signal transduction protein CheY  55.56 
 
 
120 aa  142  2e-33  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2994  response regulator receiver protein  55.37 
 
 
121 aa  141  3e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1593  response regulator receiver protein  53.72 
 
 
121 aa  140  5e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2620  response regulator receiver protein  53.72 
 
 
121 aa  140  5e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2428  response regulator receiver domain-containing protein  54.55 
 
 
128 aa  138  1.9999999999999998e-32  Geobacter metallireducens GS-15  Bacteria  normal  0.0310268  normal 
 
 
-
 
NC_010524  Lcho_1598  response regulator receiver protein  54.7 
 
 
120 aa  138  3e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00129925 
 
 
-
 
NC_011769  DvMF_0468  response regulator receiver protein  56.2 
 
 
120 aa  137  3.9999999999999997e-32  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.156981 
 
 
-
 
NC_010002  Daci_0654  response regulator receiver protein  54.24 
 
 
120 aa  137  4.999999999999999e-32  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.54464 
 
 
-
 
NC_013173  Dbac_1417  response regulator receiver protein  56.67 
 
 
120 aa  135  1e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.212789  n/a   
 
 
-
 
NC_008576  Mmc1_0631  response regulator receiver protein  53.72 
 
 
121 aa  136  1e-31  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1937  response regulator receiver domain-containing protein  52.89 
 
 
121 aa  135  2e-31  Methylobacillus flagellatus KT  Bacteria  normal  0.644536  normal 
 
 
-
 
NC_008609  Ppro_1606  response regulator receiver protein  52.89 
 
 
121 aa  135  2e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1541  response regulator receiver protein  55.37 
 
 
120 aa  134  6.0000000000000005e-31  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0146  response regulator receiver protein  52.14 
 
 
121 aa  134  6.0000000000000005e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1739  response regulator receiver protein  51.24 
 
 
121 aa  133  7.000000000000001e-31  Geobacter lovleyi SZ  Bacteria  normal  0.0375564  n/a   
 
 
-
 
NC_007404  Tbd_1625  response regulator receiver domain-containing protein  53.78 
 
 
120 aa  133  8e-31  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.608115 
 
 
-
 
NC_010505  Mrad2831_4812  response regulator receiver protein  54.7 
 
 
121 aa  131  3.9999999999999996e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00197217 
 
 
-
 
NC_009485  BBta_6738  response regulator receiver, CheY1  52.59 
 
 
121 aa  128  3e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.079904  normal 
 
 
-
 
NC_007925  RPC_4677  response regulator receiver domain-containing protein  51.28 
 
 
121 aa  127  3e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3298  response regulator receiver protein  50 
 
 
121 aa  127  4.0000000000000003e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4317  chemotaxis receiver protein  51.24 
 
 
122 aa  127  4.0000000000000003e-29  Agrobacterium vitis S4  Bacteria  normal  0.257676  n/a   
 
 
-
 
NC_013173  Dbac_2650  response regulator receiver protein  53.33 
 
 
120 aa  127  6e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0278  response regulator receiver protein  50.42 
 
 
121 aa  125  1.0000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  0.143889  normal  0.948049 
 
 
-
 
NC_007519  Dde_2107  response regulator receiver domain-containing protein  54.17 
 
 
120 aa  125  2.0000000000000002e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3265  response regulator receiver protein  52.07 
 
 
122 aa  124  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.571434  normal  0.349593 
 
 
-
 
NC_009052  Sbal_2111  Fis family transcriptional regulator  50.41 
 
 
121 aa  123  8.000000000000001e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0611  response regulator receiver protein  52.59 
 
 
121 aa  123  9e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2365  response regulator receiver protein  50.41 
 
 
121 aa  122  1e-27  Shewanella baltica OS195  Bacteria  decreased coverage  0.00457125  normal 
 
 
-
 
NC_009092  Shew_0114  response regulator receiver protein  50 
 
 
120 aa  122  1e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2097  response regulator receiver protein  50.41 
 
 
121 aa  122  1e-27  Shewanella baltica OS223  Bacteria  normal  0.371893  normal 
 
 
-
 
NC_009665  Shew185_2248  response regulator receiver protein  50.41 
 
 
121 aa  122  1e-27  Shewanella baltica OS185  Bacteria  normal  0.426629  n/a   
 
 
-
 
NC_007760  Adeh_1378  response regulator receiver domain-containing protein  47.93 
 
 
122 aa  123  1e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.207936  n/a   
 
 
-
 
NC_009831  Ssed_0187  response regulator receiver protein  50.42 
 
 
120 aa  122  1e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1315  response regulator receiver protein  45.83 
 
 
121 aa  122  1e-27  Thauera sp. MZ1T  Bacteria  normal  0.0517324  n/a   
 
 
-
 
NC_011145  AnaeK_2479  response regulator receiver protein  47.93 
 
 
122 aa  122  2e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.591075  n/a   
 
 
-
 
NC_011891  A2cp1_2575  response regulator receiver protein  47.93 
 
 
122 aa  122  2e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0149684  n/a   
 
 
-
 
NC_008700  Sama_3494  response regulator receiver protein  49.58 
 
 
120 aa  122  2e-27  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.313433 
 
 
-
 
NC_004347  SO_2120  chemotaxis protein CheY  50.41 
 
 
121 aa  121  3e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_3564  response regulator receiver protein  50.41 
 
 
122 aa  121  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0923704 
 
 
-
 
NC_010506  Swoo_0167  response regulator receiver protein  50.42 
 
 
120 aa  121  3e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1880  response regulator receiver protein  49.59 
 
 
121 aa  121  3e-27  Shewanella sp. MR-7  Bacteria  normal  normal  0.578036 
 
 
-
 
NC_008321  Shewmr4_2094  response regulator receiver protein  49.59 
 
 
121 aa  121  4e-27  Shewanella sp. MR-4  Bacteria  normal  normal  0.911812 
 
 
-
 
NC_011071  Smal_1853  response regulator receiver protein  47.93 
 
 
121 aa  120  5e-27  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.00571982  normal  0.853875 
 
 
-
 
NC_008577  Shewana3_2219  response regulator receiver protein  49.59 
 
 
121 aa  120  5e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1793  response regulator receiver protein  49.58 
 
 
122 aa  120  7e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2168  response regulator receiver protein  50.86 
 
 
120 aa  120  8e-27  Halorhodospira halophila SL1  Bacteria  normal  0.747517  n/a   
 
 
-
 
NC_007493  RSP_2437  chemotaxis response regulator, CheY1  48.74 
 
 
122 aa  120  9e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.365798  n/a   
 
 
-
 
NC_009049  Rsph17029_1101  response regulator receiver protein  48.74 
 
 
122 aa  119  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.956043  normal 
 
 
-
 
NC_009636  Smed_0234  response regulator receiver protein  48.74 
 
 
121 aa  119  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.695764  normal  0.176079 
 
 
-
 
NC_011138  MADE_00411  chemotaxis protein CheY  48.76 
 
 
121 aa  119  1.9999999999999998e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2318  chemotaxis protein CheY  46.15 
 
 
121 aa  118  3e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007650  BTH_II0155  chemotaxis response regulator  47.06 
 
 
120 aa  117  3.9999999999999996e-26  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0203  chemotaxis response regulator  47.06 
 
 
123 aa  117  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.989482  n/a   
 
 
-
 
NC_011369  Rleg2_0297  response regulator receiver protein  47.9 
 
 
121 aa  117  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.127858  normal  0.448356 
 
 
-
 
NC_012850  Rleg_0329  response regulator receiver protein  47.9 
 
 
121 aa  117  6e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.629137 
 
 
-
 
NC_011989  Avi_4079  chemotaxis receiver protein  47.9 
 
 
121 aa  117  7e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3622  response regulator receiver protein  47.9 
 
 
121 aa  116  9.999999999999999e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  decreased coverage  0.00707081 
 
 
-
 
NC_010717  PXO_00031  chemotaxis response regulator  47.41 
 
 
116 aa  116  9.999999999999999e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371607  n/a   
 
 
-
 
NC_007520  Tcr_0754  response regulator receiver domain-containing protein  49.57 
 
 
120 aa  116  9.999999999999999e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1447  response regulator receiver protein  47.06 
 
 
121 aa  116  9.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0915  chemotaxis protein CheY  44.17 
 
 
122 aa  115  1.9999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0788  response regulator receiver  44.17 
 
 
122 aa  115  1.9999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0147  chemotaxis protein CheY  47.41 
 
 
119 aa  114  3.9999999999999997e-25  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2142  chemotaxis protein cheY  46.22 
 
 
121 aa  114  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0880  response regulator receiver protein  45.83 
 
 
123 aa  114  5e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3680  response regulator receiver domain-containing protein  47.46 
 
 
127 aa  114  5e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.383377  normal  0.047176 
 
 
-
 
NC_009439  Pmen_1570  response regulator receiver protein  46.22 
 
 
121 aa  113  7.999999999999999e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.945276 
 
 
-
 
NC_014150  Bmur_0092  response regulator receiver protein  47.54 
 
 
122 aa  112  1.0000000000000001e-24  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0899  response regulator receiver domain-containing protein  44.54 
 
 
122 aa  112  1.0000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2842  response regulator receiver domain-containing protein  43.7 
 
 
126 aa  112  2.0000000000000002e-24  Jannaschia sp. CCS1  Bacteria  normal  0.810937  normal  0.282987 
 
 
-
 
NC_007951  Bxe_A0118  response regulator receiver domain-containing protein  47.93 
 
 
125 aa  112  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3816  response regulator receiver protein  47.93 
 
 
125 aa  112  2.0000000000000002e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2975  response regulator receiver protein  47.11 
 
 
120 aa  110  5e-24  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000459905 
 
 
-
 
NC_007954  Sden_3294  response regulator receiver  43.33 
 
 
120 aa  109  1.0000000000000001e-23  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5599  response regulator receiver  47.41 
 
 
125 aa  108  2.0000000000000002e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.833931  n/a   
 
 
-
 
NC_008043  TM1040_3207  response regulator receiver protein  44.63 
 
 
124 aa  108  2.0000000000000002e-23  Ruegeria sp. TM1040  Bacteria  normal  0.138724  normal 
 
 
-
 
NC_010084  Bmul_0164  response regulator receiver protein  47.66 
 
 
125 aa  105  2e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.498492 
 
 
-
 
NC_010524  Lcho_1536  response regulator receiver protein  37.93 
 
 
122 aa  104  3e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0284047 
 
 
-
 
NC_007912  Sde_3108  response regulator receiver domain-containing protein  45.3 
 
 
120 aa  104  4e-22  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_22620  response regulator receiver protein  41.46 
 
 
124 aa  103  8e-22  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0078  chemotaxis two-component response regulator CheY1  44.25 
 
 
126 aa  102  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
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