10 homologs were found in PanDaTox collection
for query gene Rru_A2993 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2993  hypothetical protein  100 
 
 
481 aa  990    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_17430  hypothetical protein  61.68 
 
 
480 aa  611  1e-173  Azotobacter vinelandii DJ  Bacteria  normal  0.357827  n/a   
 
 
-
 
NC_009523  RoseRS_2066  hypothetical protein  61.22 
 
 
478 aa  603  1.0000000000000001e-171  Roseiflexus sp. RS-1  Bacteria  normal  0.380444  decreased coverage  0.00122076 
 
 
-
 
NC_012912  Dd1591_4205  hypothetical protein  52.08 
 
 
478 aa  505  9.999999999999999e-143  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1615  hypothetical protein  28.29 
 
 
506 aa  196  7e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.925235 
 
 
-
 
NC_008312  Tery_0702  hypothetical protein  27.64 
 
 
500 aa  137  5e-31  Trichodesmium erythraeum IMS101  Bacteria  normal  0.166021  normal 
 
 
-
 
NC_009523  RoseRS_2171  hypothetical protein  28.26 
 
 
220 aa  71.2  0.00000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.26529  normal 
 
 
-
 
NC_008312  Tery_0869  hypothetical protein  23.68 
 
 
902 aa  60.1  0.00000008  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.181564 
 
 
-
 
NC_007413  Ava_3623  hypothetical protein  21.83 
 
 
888 aa  50.4  0.00006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.489503 
 
 
-
 
NC_009523  RoseRS_2172  hypothetical protein  25.42 
 
 
266 aa  43.9  0.007  Roseiflexus sp. RS-1  Bacteria  normal  0.517611  normal 
 
 
-
 
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