12 homologs were found in PanDaTox collection
for query gene Rru_A2802 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2802  cytochrome c, class I  100 
 
 
82 aa  163  6.9999999999999995e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.190296  n/a   
 
 
-
 
NC_009708  YpsIP31758_2134  cytochrome c family protein  32.05 
 
 
103 aa  51.2  0.000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2138  cytochrome c family protein  32.05 
 
 
104 aa  50.8  0.000006  Yersinia pestis Angola  Bacteria  normal  normal  0.203882 
 
 
-
 
NC_010465  YPK_2244  cytochrome c class I  32.05 
 
 
104 aa  50.8  0.000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1817  cytochrome c class I  35.37 
 
 
98 aa  50.8  0.000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0629  cytochrome c, class I  39.44 
 
 
102 aa  47.4  0.00007  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000000000291429  n/a   
 
 
-
 
NC_013173  Dbac_1543  cytochrome c-553  32.05 
 
 
102 aa  47  0.0001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.31178  n/a   
 
 
-
 
NC_011769  DvMF_0539  cytochrome c class I  36.25 
 
 
108 aa  46.2  0.0002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0113512 
 
 
-
 
NC_008599  CFF8240_0398  cytochrome c family protein, putative  34.69 
 
 
189 aa  41.6  0.004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1343  cytochrome c, class I  31.25 
 
 
103 aa  41.6  0.004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.022471  normal  0.750332 
 
 
-
 
NC_007519  Dde_1821  cytochrome c-553  30.38 
 
 
103 aa  40.4  0.008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000000000401467  n/a   
 
 
-
 
NC_008699  Noca_3135  cytochrome c, class I  31.03 
 
 
289 aa  40.4  0.008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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