6 homologs were found in PanDaTox collection
for query gene Rru_A1696 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1696  permease  100 
 
 
180 aa  360  8e-99  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.330275  n/a   
 
 
-
 
NC_007778  RPB_1850  permease  67.74 
 
 
173 aa  215  2e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.478457  decreased coverage  0.000494055 
 
 
-
 
NC_014151  Cfla_3211  hypothetical protein  56.91 
 
 
222 aa  181  4.0000000000000006e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000010428 
 
 
-
 
NC_012793  GWCH70_1693  permease  58.65 
 
 
143 aa  172  1.9999999999999998e-42  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0992  hypothetical protein  41.75 
 
 
211 aa  140  9.999999999999999e-33  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0752  permease  38.3 
 
 
197 aa  130  1.0000000000000001e-29  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>