More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1181 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1181  signal recognition particle-docking protein FtsY  100 
 
 
506 aa  995    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0879214  n/a   
 
 
-
 
NC_012850  Rleg_4069  signal recognition particle-docking protein FtsY  55.25 
 
 
533 aa  395  1e-108  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.605645  normal 
 
 
-
 
NC_009667  Oant_0925  signal recognition particle-docking protein FtsY  51.15 
 
 
494 aa  387  1e-106  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.248728  n/a   
 
 
-
 
NC_011369  Rleg2_3746  signal recognition particle-docking protein FtsY  54.27 
 
 
528 aa  387  1e-106  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.352146  normal 
 
 
-
 
NC_009636  Smed_3091  signal recognition particle-docking protein FtsY  59.28 
 
 
520 aa  384  1e-105  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.694563 
 
 
-
 
NC_009505  BOV_1861  cell division protein FtsY  60.47 
 
 
465 aa  378  1e-103  Brucella ovis ATCC 25840  Bacteria  normal  0.229627  n/a   
 
 
-
 
NC_004310  BR1934  signal recognition particle-docking protein FtsY  60.47 
 
 
463 aa  377  1e-103  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2723  signal recognition particle-docking protein FtsY  59.87 
 
 
488 aa  377  1e-103  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2950  signal recognition particle-docking protein FtsY  59.87 
 
 
488 aa  375  1e-102  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.260236  hitchhiker  0.00455351 
 
 
-
 
NC_008783  BARBAKC583_0017  signal recognition particle-docking protein FtsY  57.28 
 
 
387 aa  374  1e-102  Bartonella bacilliformis KC583  Bacteria  normal  0.278591  n/a   
 
 
-
 
NC_008254  Meso_3389  signal recognition particle-docking protein FtsY  60.13 
 
 
500 aa  372  1e-102  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0413  signal recognition particle-docking protein FtsY  52.33 
 
 
529 aa  374  1e-102  Xanthobacter autotrophicus Py2  Bacteria  normal  0.571496  normal  0.495384 
 
 
-
 
NC_011894  Mnod_4411  signal recognition particle-docking protein FtsY  55.77 
 
 
437 aa  371  1e-101  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2845  signal recognition particle-docking protein FtsY  59.21 
 
 
493 aa  370  1e-101  Methylobacterium populi BJ001  Bacteria  normal  normal  0.634202 
 
 
-
 
NC_010511  M446_3410  signal recognition particle-docking protein FtsY  59.67 
 
 
473 aa  371  1e-101  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.457129 
 
 
-
 
NC_011666  Msil_3223  signal recognition particle-docking protein FtsY  51.73 
 
 
483 aa  367  1e-100  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.000124674 
 
 
-
 
NC_010581  Bind_0361  signal recognition particle-docking protein FtsY  56.11 
 
 
408 aa  360  3e-98  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5338  signal recognition particle-docking protein FtsY  54.44 
 
 
466 aa  360  4e-98  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.870799  normal 
 
 
-
 
NC_011989  Avi_4196  cell division particle  61.46 
 
 
454 aa  359  8e-98  Agrobacterium vitis S4  Bacteria  normal  0.701722  n/a   
 
 
-
 
NC_009485  BBta_0375  signal recognition particle-docking protein FtsY  54.46 
 
 
315 aa  357  1.9999999999999998e-97  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.854188  normal 
 
 
-
 
NC_009484  Acry_2496  signal recognition particle-docking protein FtsY  56.86 
 
 
312 aa  352  8e-96  Acidiphilium cryptum JF-5  Bacteria  normal  0.208003  n/a   
 
 
-
 
NC_007406  Nwi_0316  cell division transporter substrate-binding protein FtsY  56.81 
 
 
315 aa  352  8.999999999999999e-96  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1413  signal recognition particle-docking protein FtsY  58.8 
 
 
316 aa  351  2e-95  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0207  signal recognition particle-docking protein FtsY  54.61 
 
 
315 aa  349  5e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.368358  n/a   
 
 
-
 
NC_008686  Pden_1921  signal recognition particle-docking protein FtsY  53.04 
 
 
346 aa  347  2e-94  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0684564 
 
 
-
 
NC_007964  Nham_0402  signal recognition particle-docking protein FtsY  55.81 
 
 
315 aa  345  1e-93  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0632  signal recognition particle-docking protein FtsY  61.25 
 
 
410 aa  342  7e-93  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.255815  normal 
 
 
-
 
NC_007958  RPD_0517  signal recognition particle-docking protein FtsY  54.28 
 
 
315 aa  342  9e-93  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1843  Signal recognition particle-docking protein FtsY  61.25 
 
 
393 aa  341  1e-92  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0101232  n/a   
 
 
-
 
NC_008044  TM1040_1942  signal recognition particle-docking protein FtsY  59.79 
 
 
386 aa  339  7e-92  Ruegeria sp. TM1040  Bacteria  normal  0.104653  normal  0.157988 
 
 
-
 
NC_009049  Rsph17029_0492  signal recognition particle-docking protein FtsY  60.9 
 
 
379 aa  338  9e-92  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0977518  normal 
 
 
-
 
NC_009512  Pput_4984  signal recognition particle-docking protein FtsY  46.15 
 
 
497 aa  338  9.999999999999999e-92  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0362  signal recognition particle-docking protein FtsY  54.28 
 
 
315 aa  337  2.9999999999999997e-91  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.568287  normal 
 
 
-
 
NC_011365  Gdia_0521  signal recognition particle-docking protein FtsY  60.8 
 
 
326 aa  337  2.9999999999999997e-91  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.948166  normal 
 
 
-
 
NC_007802  Jann_1214  signal recognition particle-docking protein FtsY  55.02 
 
 
381 aa  337  2.9999999999999997e-91  Jannaschia sp. CCS1  Bacteria  normal  normal  0.911823 
 
 
-
 
NC_008700  Sama_3468  cell division protein FtsY  54.92 
 
 
563 aa  336  5e-91  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.00185267  normal 
 
 
-
 
NC_007925  RPC_0212  signal recognition particle-docking protein FtsY  53.57 
 
 
316 aa  335  1e-90  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0135462 
 
 
-
 
NC_002947  PP_5111  signal recognition particle-docking protein FtsY  47.45 
 
 
494 aa  335  2e-90  Pseudomonas putida KT2440  Bacteria  normal  0.489493  normal 
 
 
-
 
NC_010322  PputGB1_5161  signal recognition particle-docking protein FtsY  48.06 
 
 
510 aa  334  2e-90  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4065  signal recognition particle-docking protein FtsY  42.55 
 
 
452 aa  332  7.000000000000001e-90  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2853  signal recognition particle-docking protein FtsY  56.62 
 
 
309 aa  330  5.0000000000000004e-89  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4586  cell division protein FtsY  52.06 
 
 
510 aa  329  6e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4751  cell division transporter substrate-binding protein FtsY  54.17 
 
 
505 aa  329  8e-89  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.974367  normal  0.0527316 
 
 
-
 
NC_009952  Dshi_2725  hypothetical protein  60.66 
 
 
499 aa  327  2.0000000000000001e-88  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.239457  normal 
 
 
-
 
NC_008322  Shewmr7_3847  signal recognition particle-docking protein FtsY  54.14 
 
 
584 aa  328  2.0000000000000001e-88  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00993758  normal 
 
 
-
 
NC_008577  Shewana3_3972  signal recognition particle-docking protein FtsY  53.5 
 
 
562 aa  327  3e-88  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00124798  normal 
 
 
-
 
NC_004578  PSPTO_0427  signal recognition particle-docking protein FtsY  42.28 
 
 
513 aa  327  4.0000000000000003e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3944  signal recognition particle-docking protein FtsY  45.32 
 
 
485 aa  327  4.0000000000000003e-88  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.0000907128  n/a   
 
 
-
 
NC_009832  Spro_0221  signal recognition particle-docking protein FtsY  51.22 
 
 
535 aa  325  1e-87  Serratia proteamaculans 568  Bacteria  normal  0.359451  normal  0.0478806 
 
 
-
 
NC_012917  PC1_0099  cell division protein FtsY  44.17 
 
 
495 aa  324  2e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4164  signal recognition particle-docking protein FtsY  53.5 
 
 
611 aa  323  3e-87  Shewanella baltica OS185  Bacteria  hitchhiker  0.00648424  n/a   
 
 
-
 
NC_010501  PputW619_0354  signal recognition particle-docking protein FtsY  50.28 
 
 
514 aa  323  5e-87  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0171  signal recognition particle-docking protein FtsY  53.5 
 
 
621 aa  322  7e-87  Shewanella baltica OS155  Bacteria  hitchhiker  0.000116132  n/a   
 
 
-
 
NC_009997  Sbal195_4295  signal recognition particle-docking protein FtsY  53.5 
 
 
540 aa  322  9.999999999999999e-87  Shewanella baltica OS195  Bacteria  hitchhiker  0.00341336  normal  0.0288649 
 
 
-
 
NC_011663  Sbal223_4094  signal recognition particle-docking protein FtsY  53.5 
 
 
615 aa  322  9.999999999999999e-87  Shewanella baltica OS223  Bacteria  hitchhiker  0.00000394743  normal 
 
 
-
 
NC_008321  Shewmr4_3774  signal recognition particle-docking protein FtsY  53.18 
 
 
582 aa  322  9.999999999999999e-87  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00390438  normal 
 
 
-
 
NC_009092  Shew_3606  signal recognition particle-docking protein FtsY  43.08 
 
 
561 aa  321  1.9999999999999998e-86  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00455766  normal 
 
 
-
 
NC_013421  Pecwa_0093  cell division protein FtsY  50.8 
 
 
471 aa  319  6e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00280  signal recognition particle GTPase  53.16 
 
 
408 aa  319  7e-86  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0289  signal recognition particle-docking protein FtsY  53.18 
 
 
482 aa  319  7e-86  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000644129  n/a   
 
 
-
 
NC_012560  Avin_48100  signal recognition particle-docking protein FtsY  52.99 
 
 
451 aa  318  1e-85  Azotobacter vinelandii DJ  Bacteria  normal  0.0287334  n/a   
 
 
-
 
NC_010159  YpAngola_A0577  cell division protein  53.11 
 
 
553 aa  317  2e-85  Yersinia pestis Angola  Bacteria  normal  0.0105476  normal 
 
 
-
 
NC_009708  YpsIP31758_0239  cell division protein FtsY  53.11 
 
 
541 aa  317  3e-85  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0752366  n/a   
 
 
-
 
NC_009901  Spea_3980  signal recognition particle-docking protein FtsY  53.77 
 
 
643 aa  317  3e-85  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00176908  n/a   
 
 
-
 
NC_010465  YPK_3979  signal recognition particle-docking protein FtsY  53.11 
 
 
523 aa  317  4e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3877  signal recognition particle-docking protein FtsY  51.8 
 
 
432 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002138  signal recognition particle receptor protein FtsY  52.49 
 
 
407 aa  314  2.9999999999999996e-84  Vibrio sp. Ex25  Bacteria  normal  0.745787  n/a   
 
 
-
 
NC_010506  Swoo_0201  signal recognition particle-docking protein FtsY  50.3 
 
 
491 aa  313  3.9999999999999997e-84  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00197589  decreased coverage  0.000000348094 
 
 
-
 
NC_009831  Ssed_0219  signal recognition particle-docking protein FtsY  51.91 
 
 
540 aa  312  9e-84  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3505  signal recognition particle-docking protein FtsY  51.85 
 
 
487 aa  311  1e-83  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000471575  n/a   
 
 
-
 
NC_008345  Sfri_0275  signal recognition particle-docking protein FtsY  51.76 
 
 
587 aa  310  2.9999999999999997e-83  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.125713  n/a   
 
 
-
 
NC_009457  VC0395_A2374  signal recognition particle-docking protein FtsY  51.83 
 
 
387 aa  309  5.9999999999999995e-83  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000224512  n/a   
 
 
-
 
NC_011312  VSAL_I2903  cell division protein FtsY  51.94 
 
 
410 aa  309  5.9999999999999995e-83  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.297557  n/a   
 
 
-
 
NC_003910  CPS_0157  signal recognition particle-docking protein FtsY  48.28 
 
 
481 aa  309  8e-83  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1001  signal recognition particle-docking protein FtsY  45.68 
 
 
397 aa  309  9e-83  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00000041577  hitchhiker  0.00000536863 
 
 
-
 
NC_011149  SeAg_B3773  cell division protein FtsY  50.15 
 
 
491 aa  308  1.0000000000000001e-82  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3883  cell division protein FtsY  49.85 
 
 
491 aa  307  3e-82  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.629527  normal 
 
 
-
 
NC_011080  SNSL254_A3840  cell division protein FtsY  50.64 
 
 
491 aa  307  3e-82  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3868  cell division protein FtsY  51.42 
 
 
511 aa  307  4.0000000000000004e-82  Enterobacter sp. 638  Bacteria  normal  0.046763  normal  0.12131 
 
 
-
 
NC_008709  Ping_0623  signal recognition particle-docking protein FtsY  49.02 
 
 
453 aa  306  4.0000000000000004e-82  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4175  signal recognition particle-docking protein FtsY  54.25 
 
 
475 aa  307  4.0000000000000004e-82  Pseudomonas mendocina ymp  Bacteria  normal  0.0143973  normal 
 
 
-
 
CP001509  ECD_03313  fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein  49.85 
 
 
498 aa  306  6e-82  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0251  signal recognition particle-docking protein FtsY  49.85 
 
 
497 aa  306  6e-82  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03266  hypothetical protein  49.85 
 
 
498 aa  306  6e-82  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4784  cell division protein FtsY  49.85 
 
 
498 aa  306  6e-82  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3747  cell division protein FtsY  51.15 
 
 
512 aa  306  7e-82  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3663  cell division protein FtsY  49.85 
 
 
498 aa  306  8.000000000000001e-82  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0252  cell division protein FtsY  49.85 
 
 
498 aa  306  8.000000000000001e-82  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3942  cell division protein FtsY  50.32 
 
 
491 aa  305  1.0000000000000001e-81  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.643003  normal 
 
 
-
 
NC_007492  Pfl01_5337  signal recognition particle-docking protein FtsY  53.35 
 
 
515 aa  305  1.0000000000000001e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.760188 
 
 
-
 
NC_009801  EcE24377A_3946  cell division protein FtsY  50 
 
 
497 aa  305  1.0000000000000001e-81  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3746  signal recognition particle-docking protein FtsY  50.33 
 
 
405 aa  305  1.0000000000000001e-81  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3763  cell division protein FtsY  50.32 
 
 
491 aa  304  2.0000000000000002e-81  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1934  cell division transporter substrate-binding protein FtsY  47.63 
 
 
362 aa  305  2.0000000000000002e-81  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.249425  n/a   
 
 
-
 
NC_010658  SbBS512_E3858  cell division protein FtsY  50 
 
 
497 aa  304  3.0000000000000004e-81  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0934  signal recognition particle-docking protein FtsY  44.39 
 
 
478 aa  304  3.0000000000000004e-81  Psychrobacter arcticus 273-4  Bacteria  decreased coverage  0.000000000272201  normal 
 
 
-
 
NC_007969  Pcryo_1481  signal recognition particle-docking protein FtsY  47.76 
 
 
477 aa  303  5.000000000000001e-81  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0171168  normal 
 
 
-
 
NC_008309  HS_0414  signal recognition particle-docking protein FtsY  50.16 
 
 
447 aa  303  6.000000000000001e-81  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_04900  signal recognition particle receptor FtsY  53.38 
 
 
451 aa  303  6.000000000000001e-81  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.653255  normal 
 
 
-
 
NC_011138  MADE_03537  signal recognition particle GTPase  50 
 
 
541 aa  302  8.000000000000001e-81  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
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