12 homologs were found in PanDaTox collection
for query gene Rru_A0625 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A0625  hypothetical protein  100 
 
 		 181 aa  359  1e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.482325  n/a   
 
 
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NC_011666  Msil_2044  cobalamin B12-binding domain protein  28.38 
 
 		 322 aa  62.4  0.000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.10014 
 
 
-
 
NC_009485  BBta_6420  regulatory protein  31.82 
 
 		 298 aa  58.5  0.00000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3738  cobalamin B12-binding  37.84 
 
 		 295 aa  53.9  0.000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0514741  hitchhiker  0.000397426 
 
 
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NC_010725  Mpop_5363  cobalamin B12-binding domain protein  30.88 
 
 		 295 aa  51.6  0.000006  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.222451 
 
 
-
 
NC_007778  RPB_3983  cobalamin B12-binding  37.84 
 
 		 297 aa  50.1  0.00002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.110014 
 
 
-
 
NC_010172  Mext_4818  cobalamin B12-binding  34.62 
 
 		 295 aa  48.5  0.00005  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0282742 
 
 
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NC_011004  Rpal_1728  cobalamin B12-binding domain protein  31.65 
 
 		 293 aa  48.1  0.00006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_011757  Mchl_5285  cobalamin B12-binding  33.97 
 
 		 295 aa  47.4  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.109441  normal  1 
 
 
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NC_007925  RPC_0262  AppA/PpaA family photosynthesis gene regulator  31.19 
 
 		 356 aa  42.4  0.003  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.551599 
 
 
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NC_007958  RPD_0460  AppA/PpaA family photosynthesis gene regulator  27.36 
 
 		 330 aa  42.4  0.003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.673068  normal  0.054153 
 
 
-
 
NC_007925  RPC_1311  cobalamin B12-binding  23.42 
 
 		 289 aa  41.6  0.006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.650213 
 
 
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