18 homologs were found in PanDaTox collection
for query gene Rpic_4949 on replicon NC_010683
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010683  Rpic_4949  transcriptional modulator of MazE/toxin, MazF  100 
 
 
123 aa  251  2.0000000000000002e-66  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012851  Rpic12D_5446  transcriptional modulator of MazE/toxin, MazF  96.75 
 
 
123 aa  245  2e-64  Ralstonia pickettii 12D  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0832  transcriptional modulator of MazE/toxin, MazF  34.17 
 
 
113 aa  57.4  0.00000006  Geobacter uraniireducens Rf4  Bacteria  normal  0.737175  n/a   
 
 
-
 
NC_008726  Mvan_1144  transcriptional modulator of MazE/toxin, MazF  29.51 
 
 
115 aa  53.5  0.0000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011723  PCC8801_4547  transcriptional modulator of MazE/toxin, MazF  32.77 
 
 
112 aa  50.1  0.000009  Cyanothece sp. PCC 8801  Bacteria  normal  normal  0.653702 
 
 
-
 
NC_013131  Caci_7291  transcriptional modulator of MazE/toxin, MazF  31.75 
 
 
123 aa  49.7  0.00001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.141248  normal 
 
 
-
 
NC_011901  Tgr7_2435  transcriptional modulator of MazE/toxin, MazF  31.71 
 
 
113 aa  48.9  0.00002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.250291  n/a   
 
 
-
 
NC_009565  TBFG_12814  hypothetical protein  28.46 
 
 
118 aa  48.1  0.00004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000412903  normal 
 
 
-
 
NC_013530  Xcel_2312  transcriptional modulator of MazE/toxin, MazF  27.05 
 
 
117 aa  46.2  0.0001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.113933  n/a   
 
 
-
 
NC_013922  Nmag_3399  transcriptional modulator of MazE/toxin, MazF  31.71 
 
 
117 aa  44.7  0.0004  Natrialba magadii ATCC 43099  Archaea  normal  0.398521  n/a   
 
 
-
 
NC_009483  Gura_1971  transcriptional modulator of MazE/toxin, MazF  30.17 
 
 
114 aa  43.9  0.0007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1348  transcriptional modulator of MazE/toxin, MazF  29.75 
 
 
116 aa  43.1  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000000815798  n/a   
 
 
-
 
NC_013171  Apre_0974  transcriptional modulator of MazE/toxin, MazF  29.75 
 
 
116 aa  42.4  0.002  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.836231  n/a   
 
 
-
 
NC_009513  Lreu_0256  transcriptional modulator of MazE/toxin, MazF  29.13 
 
 
124 aa  41.2  0.005  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000117261  n/a   
 
 
-
 
NC_008312  Tery_1071  transcriptional modulator of MazE/toxin, MazF  30.77 
 
 
121 aa  40.8  0.006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0291  PemK family protein  25.6 
 
 
117 aa  40.8  0.006  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0286  PemK family protein  25.6 
 
 
117 aa  40.4  0.008  Clostridium perfringens SM101  Bacteria  normal  0.2389  n/a   
 
 
-
 
NC_013746  Htur_4955  transcriptional modulator of MazE/toxin, MazF  26.05 
 
 
118 aa  40.4  0.008  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
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