16 homologs were found in PanDaTox collection
for query gene Rpic_0980 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_0980  hypothetical protein  100 
 
 
181 aa  362  1e-99  Ralstonia pickettii 12J  Bacteria  normal  0.213809  normal  0.0628695 
 
 
-
 
NC_012856  Rpic12D_1076  hypothetical protein  93.37 
 
 
181 aa  342  2e-93  Ralstonia pickettii 12D  Bacteria  normal  0.376591  normal 
 
 
-
 
NC_003295  RSc1137  hypothetical protein  76.88 
 
 
180 aa  267  5e-71  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2884  hypothetical protein  30.81 
 
 
176 aa  82  0.000000000000004  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2482  hypothetical protein  30.06 
 
 
172 aa  79.3  0.00000000000003  Saccharophagus degradans 2-40  Bacteria  normal  0.470104  normal 
 
 
-
 
NC_010725  Mpop_5049  Saccharopine dehydrogenase  32.57 
 
 
554 aa  79.3  0.00000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.529688 
 
 
-
 
NC_011071  Smal_3157  hypothetical protein  32.35 
 
 
174 aa  78.2  0.00000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4779  saccharopine dehydrogenase  31.21 
 
 
553 aa  75.1  0.0000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4536  saccharopine dehydrogenase  32.07 
 
 
557 aa  73.2  0.000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.802227  normal  0.151907 
 
 
-
 
NC_012850  Rleg_0723  Saccharopine dehydrogenase  31.98 
 
 
574 aa  68.2  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.554623  normal 
 
 
-
 
NC_007802  Jann_3456  hypothetical protein  30.59 
 
 
174 aa  63.9  0.000000001  Jannaschia sp. CCS1  Bacteria  normal  0.316596  normal 
 
 
-
 
NC_011757  Mchl_4996  Saccharopine dehydrogenase  32.07 
 
 
554 aa  59.7  0.00000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.693151  normal  0.884276 
 
 
-
 
NC_010717  PXO_04871  hypothetical protein  30.81 
 
 
176 aa  58.2  0.00000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0669  Saccharopine dehydrogenase  31.07 
 
 
577 aa  54.3  0.0000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.986243  normal 
 
 
-
 
NC_008043  TM1040_3620  saccharopine dehydrogenase  25.29 
 
 
527 aa  47.4  0.0001  Ruegeria sp. TM1040  Bacteria  normal  decreased coverage  0.00695172 
 
 
-
 
NC_010338  Caul_0108  saccharopine dehydrogenase  27.17 
 
 
550 aa  42  0.004  Caulobacter sp. K31  Bacteria  normal  0.566304  normal 
 
 
-
 
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