8 homologs were found in PanDaTox collection
for query gene Rpic12D_5195 on replicon NC_012849
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1530  hypothetical protein  100 
 
 
416 aa  843    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5195  conserved hypothetical protein; putative PilL-like protein; putative exported protein  100 
 
 
416 aa  843    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007972  Rmet_6297  hypothetical protein  53.81 
 
 
408 aa  414  1e-114  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5549  hypothetical protein  41.58 
 
 
422 aa  297  3e-79  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0195272 
 
 
-
 
NC_010553  BamMC406_6567  hypothetical protein  43.39 
 
 
428 aa  297  3e-79  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010683  Rpic_5034  hypothetical protein  42.68 
 
 
300 aa  126  7e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012851  Rpic12D_5440  putative PilL-like protein  42.33 
 
 
163 aa  121  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5454  hypothetical protein  28.68 
 
 
424 aa  48.1  0.0003  Polaromonas sp. JS666  Bacteria  normal  0.131248  decreased coverage  0.00950425 
 
 
-
 
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