6 homologs were found in PanDaTox collection
for query gene Rpic12D_4801 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012855  Rpic12D_4801  helix-turn-helix domain protein  100 
 
 		 127 aa  251  2.0000000000000002e-66  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
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NC_007950  Bpro_5420  hypothetical protein  33.77 
 
 		 92 aa  45.8  0.0002  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_2650  XRE family transcriptional regulator  35.82 
 
 		 113 aa  43.5  0.0009  Polaromonas sp. JS666  Bacteria  normal  0.20024  normal  1 
 
 
-
 
NC_003296  RS01906  hypothetical protein  51.22 
 
 		 180 aa  41.2  0.005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.610922  normal  0.293874 
 
 
-
 
NC_010678  Rpic_4487  transcriptional regulator, XRE family  51.22 
 
 		 177 aa  40.8  0.006  Ralstonia pickettii 12J  Bacteria  normal  0.181354  normal  0.422127 
 
 
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NC_012857  Rpic12D_4620  transcriptional regulator, XRE family  51.22 
 
 		 177 aa  40.8  0.006  Ralstonia pickettii 12D  Bacteria  normal  0.157225  normal  0.499919 
 
 
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