6 homologs were found in PanDaTox collection
for query gene Rpic12D_4709 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012855  Rpic12D_4709    100 
 
 		 318 bp  630  1e-179  Ralstonia pickettii 12D  Bacteria  normal  0.225613  normal  0.172047 
 
 
-
 
NC_003296  RSp0558  ISRSO16-transposase ORFB protein  88.65 
 
 		 843 bp  305  4.0000000000000003e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.269801 
 
 
-
 
NC_003296  RSp1628  ISRSO16-transposase ORFB protein  87.59 
 
 		 810 bp  281  6e-74  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_1036    88.41 
 
 		 1858 bp  220  2e-55  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.931088 
 
 
-
 
NC_007614  Nmul_A1693  integrase catalytic subunit  80.91 
 
 		 504 bp  103  3e-20  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.271458  n/a   
 
 
-
 
NC_010551  BamMC406_1816    86.27 
 
 		 291 bp  46.1  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.787707 
 
 
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