170 homologs were found in PanDaTox collection
for query gene Rpic12D_3981 on replicon NC_012857
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010678  Rpic_3867  3-demethylubiquinone-9 3-methyltransferase  100 
 
 
159 aa  331  2e-90  Ralstonia pickettii 12J  Bacteria  normal  normal  0.44427 
 
 
-
 
NC_012857  Rpic12D_3981  3-demethylubiquinone-9 3-methyltransferase  100 
 
 
159 aa  331  2e-90  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4637  3-demethylubiquinone-9 3-methyltransferase  88.05 
 
 
159 aa  299  1e-80  Ralstonia eutropha JMP134  Bacteria  normal  0.874058  n/a   
 
 
-
 
NC_012792  Vapar_5736  3-demethylubiquinone-9 3-methyltransferase  85.53 
 
 
159 aa  288  2e-77  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1399  3-demethylubiquinone-9 3-methyltransferase  84.91 
 
 
165 aa  288  3e-77  Polaromonas sp. JS666  Bacteria  normal  normal  0.3347 
 
 
-
 
NC_007974  Rmet_3848  putative 3-demethylubiquinone-9 3-methyltransferase  86.16 
 
 
161 aa  285  2e-76  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.52304 
 
 
-
 
NC_008781  Pnap_4028  3-demethylubiquinone-9 3-methyltransferase  82.39 
 
 
176 aa  280  4.0000000000000003e-75  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.636645 
 
 
-
 
NC_003296  RS03882  hypothetical protein  83.02 
 
 
165 aa  277  4e-74  Ralstonia solanacearum GMI1000  Bacteria  normal  0.279037  normal  0.767846 
 
 
-
 
NC_009483  Gura_0848  3-demethylubiquinone-9 3-methyltransferase  83.44 
 
 
161 aa  275  1e-73  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136676  n/a   
 
 
-
 
NC_007614  Nmul_A2171  3-demethylubiquinone-9 3-methyltransferase  85.44 
 
 
178 aa  271  2.0000000000000002e-72  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1462  hypothetical protein  80.5 
 
 
159 aa  270  6e-72  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00432951  normal  0.76996 
 
 
-
 
NC_007517  Gmet_2483  3-demethylubiquinone-9 3-methyltransferase  81.53 
 
 
161 aa  269  1e-71  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000913491  normal 
 
 
-
 
NC_011992  Dtpsy_1607  3-demethylubiquinone-9 3-methyltransferase  78.34 
 
 
161 aa  265  1e-70  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2437  hypothetical protein  79.62 
 
 
161 aa  264  2.9999999999999995e-70  Geobacter sulfurreducens PCA  Bacteria  hitchhiker  0.00410034  n/a   
 
 
-
 
NC_010803  Clim_0594  3-demethylubiquinone-9 3-methyltransferase  78.34 
 
 
161 aa  264  5e-70  Chlorobium limicola DSM 245  Bacteria  normal  0.382309  n/a   
 
 
-
 
NC_010571  Oter_2255  3-demethylubiquinone-9 3-methyltransferase  79.11 
 
 
173 aa  262  2e-69  Opitutus terrae PB90-1  Bacteria  normal  0.604126  normal  0.0160885 
 
 
-
 
NC_010322  PputGB1_2287  3-demethylubiquinone-9 3-methyltransferase  74.84 
 
 
159 aa  262  2e-69  Pseudomonas putida GB-1  Bacteria  normal  0.719915  normal  0.308943 
 
 
-
 
NC_010501  PputW619_2371  3-demethylubiquinone-9 3-methyltransferase  75.47 
 
 
169 aa  260  4.999999999999999e-69  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_28960  hypothetical protein  77.99 
 
 
159 aa  259  1e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.295823  hitchhiker  0.0000347275 
 
 
-
 
NC_010814  Glov_1008  3-demethylubiquinone-9 3-methyltransferase  76.43 
 
 
161 aa  258  3e-68  Geobacter lovleyi SZ  Bacteria  normal  0.214378  n/a   
 
 
-
 
NC_008009  Acid345_1669  3-demethylubiquinone-9 3-methyltransferase  74.84 
 
 
158 aa  258  3e-68  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8264  3-demethylubiquinone-9 3-methyltransferase  78.62 
 
 
158 aa  258  3e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.677958  n/a   
 
 
-
 
NC_011892  Mnod_8415  3-demethylubiquinone-9 3-methyltransferase  77.99 
 
 
158 aa  257  5.0000000000000005e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4000  hypothetical protein  77.99 
 
 
159 aa  256  1e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.656805  n/a   
 
 
-
 
NC_012918  GM21_2295  3-demethylubiquinone-9 3-methyltransferase  77.92 
 
 
162 aa  255  2e-67  Geobacter sp. M21  Bacteria  n/a    normal  0.0311325 
 
 
-
 
NC_010511  M446_3648  3-demethylubiquinone-9 3-methyltransferase  77.99 
 
 
158 aa  255  2e-67  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00571731 
 
 
-
 
NC_002947  PP_3629  3-demethylubiquinone-9 3-methyltransferase  72.96 
 
 
159 aa  253  6e-67  Pseudomonas putida KT2440  Bacteria  normal  0.481282  normal 
 
 
-
 
NC_007964  Nham_0783  3-demethylubiquinone-9 3-methyltransferase  75.32 
 
 
166 aa  252  1.0000000000000001e-66  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0011  3-demethylubiquinone-9 3-methyltransferase  75.16 
 
 
167 aa  251  2.0000000000000002e-66  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.448662  normal  0.0489572 
 
 
-
 
NC_009485  BBta_2181  hypothetical protein  77.07 
 
 
159 aa  251  2.0000000000000002e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1925  3-demethylubiquinone-9 3-methyltransferase  75.97 
 
 
162 aa  250  5.000000000000001e-66  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00859157  n/a   
 
 
-
 
NC_008254  Meso_1468  3-demethylubiquinone-9 3-methyltransferase  74.68 
 
 
179 aa  249  1e-65  Chelativorans sp. BNC1  Bacteria  normal  0.852155  n/a   
 
 
-
 
NC_008686  Pden_0500  3-demethylubiquinone-9 3-methyltransferase  75.95 
 
 
159 aa  249  1e-65  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2104  3-demethylubiquinone-9 3-methyltransferase  71.07 
 
 
159 aa  249  1e-65  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2956  3-demethylubiquinone-9 3-methyltransferase  72.33 
 
 
159 aa  249  1e-65  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_2877  3-demethylubiquinone-9 3-methyltransferase  72.15 
 
 
164 aa  248  3e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4431  3-demethylubiquinone-9 3-methyltransferase  73.42 
 
 
161 aa  246  7e-65  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0688  3-demethylubiquinone-9 3-methyltransferase  77.85 
 
 
159 aa  245  2e-64  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.331587  normal 
 
 
-
 
NC_012850  Rleg_2549  3-demethylubiquinone-9 3-methyltransferase  76.58 
 
 
157 aa  241  3e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3319  3-demethylubiquinone-9 3-methyltransferase  70.89 
 
 
157 aa  241  3e-63  Anaeromyxobacter sp. K  Bacteria  normal  0.850052  n/a   
 
 
-
 
NC_007794  Saro_2888  3-demethylubiquinone-9 3-methyltransferase  73.38 
 
 
165 aa  240  6e-63  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.577012  n/a   
 
 
-
 
NC_011369  Rleg2_2242  3-demethylubiquinone-9 3-methyltransferase  76.58 
 
 
157 aa  240  7e-63  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3393  3-demethylubiquinone-9 3-methyltransferase  70.25 
 
 
157 aa  239  1e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3253  3-demethylubiquinone-9 3-methyltransferase  70.89 
 
 
157 aa  238  2e-62  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3630  hypothetical protein  67.92 
 
 
165 aa  238  2.9999999999999997e-62  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0256913  normal 
 
 
-
 
NC_012852  Rleg_6022  3-demethylubiquinone-9 3-methyltransferase  70.19 
 
 
157 aa  238  4e-62  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3194  3-demethylubiquinone-9 3-methyltransferase  70.89 
 
 
157 aa  237  5e-62  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8684  3-demethylubiquinone-9 3-methyltransferase  79.84 
 
 
143 aa  221  3e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2267  3-demethylubiquinone-9 3-methyltransferase  82.64 
 
 
150 aa  211  3.9999999999999995e-54  Acidovorax sp. JS42  Bacteria  normal  0.0386327  normal  0.842376 
 
 
-
 
NC_011666  Msil_2215  3-demethylubiquinone-9 3-methyltransferase  64.78 
 
 
159 aa  208  2e-53  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010510  Mrad2831_6218  3-demethylubiquinone-9 3-methyltransferase  65.16 
 
 
166 aa  207  4e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.701967  normal  0.334092 
 
 
-
 
NC_010581  Bind_3228  3-demethylubiquinone-9 3-methyltransferase  55.7 
 
 
173 aa  170  9e-42  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0502  hypothetical protein  80.21 
 
 
141 aa  167  6e-41  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0663  3-demethylubiquinone-9 3-methyltransferase  80.21 
 
 
141 aa  167  6e-41  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4782  3-demethylubiquinone-9 3-methyltransferase  53.16 
 
 
163 aa  167  8e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4069  3-demethylubiquinone-9 3-methyltransferase  50.94 
 
 
158 aa  155  2e-37  Frankia sp. EAN1pec  Bacteria  normal  0.0386051  normal 
 
 
-
 
NC_011004  Rpal_4903  3-demethylubiquinone-9 3-methyltransferase  45.57 
 
 
159 aa  152  1e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.517944  n/a   
 
 
-
 
NC_007494  RSP_3112  hypothetical protein  51.03 
 
 
158 aa  149  2e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0318978  n/a   
 
 
-
 
NC_009050  Rsph17029_3841  3-demethylubiquinone-9 3-methyltransferase  51.03 
 
 
158 aa  149  2e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0119527  normal 
 
 
-
 
NC_010725  Mpop_5293  3-demethylubiquinone-9 3-methyltransferase  43.67 
 
 
163 aa  147  5e-35  Methylobacterium populi BJ001  Bacteria  normal  normal  0.405768 
 
 
-
 
NC_010172  Mext_4751  3-demethylubiquinone-9 3-methyltransferase  44.03 
 
 
163 aa  144  3e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.492463  normal 
 
 
-
 
NC_013757  Gobs_3284  3-demethylubiquinone-9 3-methyltransferase  46.84 
 
 
159 aa  143  8.000000000000001e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.313137  n/a   
 
 
-
 
NC_011757  Mchl_5218  3-demethylubiquinone-9 3-methyltransferase  43.4 
 
 
163 aa  142  2e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.57066  normal  0.0284682 
 
 
-
 
NC_010338  Caul_0726  3-demethylubiquinone-9 3-methyltransferase  45.03 
 
 
159 aa  141  3e-33  Caulobacter sp. K31  Bacteria  normal  0.958881  normal  0.827037 
 
 
-
 
NC_007778  RPB_4223  3-demethylubiquinone-9 3-methyltransferase  44.3 
 
 
160 aa  141  4e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.153142 
 
 
-
 
NC_008541  Arth_2204  3-demethylubiquinone-9 3-methyltransferase  45.28 
 
 
158 aa  141  4e-33  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00390727  n/a   
 
 
-
 
NC_013235  Namu_5222  3-demethylubiquinone-9 3-methyltransferase  51.06 
 
 
159 aa  140  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_4108  3-demethylubiquinone-9 3-methyltransferase  47.1 
 
 
160 aa  140  6e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.105651  n/a   
 
 
-
 
NC_012850  Rleg_2821  3-demethylubiquinone-9 3-methyltransferase  43.05 
 
 
158 aa  140  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.30678 
 
 
-
 
NC_013132  Cpin_5547  3-demethylubiquinone-9 3-methyltransferase  43.67 
 
 
157 aa  139  1.9999999999999998e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.388463  normal 
 
 
-
 
NC_008146  Mmcs_4089  3-demethylubiquinone-9 3-methyltransferase  47.02 
 
 
157 aa  136  1e-31  Mycobacterium sp. MCS  Bacteria  normal  0.0395485  n/a   
 
 
-
 
NC_008705  Mkms_4165  3-demethylubiquinone-9 3-methyltransferase  47.02 
 
 
157 aa  136  1e-31  Mycobacterium sp. KMS  Bacteria  normal  0.982524  normal 
 
 
-
 
NC_008726  Mvan_4607  3-demethylubiquinone-9 3-methyltransferase  48.05 
 
 
157 aa  136  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.576518  normal 
 
 
-
 
NC_009077  Mjls_4319  3-demethylubiquinone-9 3-methyltransferase  47.02 
 
 
157 aa  136  1e-31  Mycobacterium sp. JLS  Bacteria  normal  normal  0.26374 
 
 
-
 
NC_007964  Nham_3519  3-demethylubiquinone-9 3-methyltransferase  45 
 
 
157 aa  135  2e-31  Nitrobacter hamburgensis X14  Bacteria  normal  0.194698  n/a   
 
 
-
 
NC_014151  Cfla_2499  3-demethylubiquinone-9 3-methyltransferase  43.05 
 
 
159 aa  135  2e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2166  3-demethylubiquinone-9 3-methyltransferase  43.75 
 
 
170 aa  134  7.000000000000001e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1272  3-demethylubiquinone-9 3-methyltransferase  42.77 
 
 
157 aa  132  1.9999999999999998e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.123176 
 
 
-
 
NC_007777  Francci3_2914  3-demethylubiquinone-9 3-methyltransferase  43.14 
 
 
157 aa  132  1.9999999999999998e-30  Frankia sp. CcI3  Bacteria  normal  0.269995  normal  0.303399 
 
 
-
 
NC_010002  Daci_4027  3-demethylubiquinone-9 3-methyltransferase  43.31 
 
 
167 aa  131  3e-30  Delftia acidovorans SPH-1  Bacteria  normal  0.560567  normal  0.360128 
 
 
-
 
NC_010623  Bphy_4083  3-demethylubiquinone-9 3-methyltransferase  41.29 
 
 
158 aa  130  6e-30  Burkholderia phymatum STM815  Bacteria  normal  0.394199  normal 
 
 
-
 
NC_007951  Bxe_A3278  putative 3-demethylubiquinone-93- methyltransferase protein  44.3 
 
 
156 aa  130  7.999999999999999e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.278374  normal  0.25029 
 
 
-
 
NC_009719  Plav_3503  3-demethylubiquinone-9 3-methyltransferase  43.23 
 
 
156 aa  130  9e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.936272  normal  0.391713 
 
 
-
 
NC_013739  Cwoe_4234  3-demethylubiquinone-9 3-methyltransferase  42.86 
 
 
159 aa  128  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.24428 
 
 
-
 
NC_009511  Swit_4586  3-demethylubiquinone-9 3-methyltransferase  44.52 
 
 
156 aa  128  3e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0738  3-demethylubiquinone-9 3-methyltransferase  47.02 
 
 
153 aa  125  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.459574  n/a   
 
 
-
 
NC_007948  Bpro_2381  3-demethylubiquinone-9 3-methyltransferase  39.18 
 
 
165 aa  124  6e-28  Polaromonas sp. JS666  Bacteria  normal  normal  0.721078 
 
 
-
 
NC_013172  Bfae_22400  hypothetical protein  43.79 
 
 
178 aa  122  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.100085  n/a   
 
 
-
 
NC_008009  Acid345_1451  3-demethylubiquinone-9 3-methyltransferase  40.38 
 
 
157 aa  122  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.334172  normal 
 
 
-
 
NC_013037  Dfer_1329  3-demethylubiquinone-9 3-methyltransferase  39.22 
 
 
163 aa  122  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.998989  normal  0.921915 
 
 
-
 
NC_013947  Snas_0556  3-demethylubiquinone-9 3-methyltransferase  40.51 
 
 
157 aa  120  6e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1066  hypothetical protein  42.28 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6056  3-demethylubiquinone-9 3-methyltransferase  39.6 
 
 
157 aa  119  9.999999999999999e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0756  3-demethylubiquinone-9 3-methyltransferase  40.14 
 
 
158 aa  120  9.999999999999999e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.177984  n/a   
 
 
-
 
NC_008784  BMASAVP1_0056  3-demethylubiquinone-9 3-methyltransferase family protein  42.28 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0362  3-demethylubiquinone-9 3-methyltransferase family protein  42.28 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1731  3-demethylubiquinone-9 3-methyltransferase family protein  42.28 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1223  3-demethylubiquinone-9 3-methyltransferase family protein  42.28 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0864274  n/a   
 
 
-
 
NC_007404  Tbd_1049  hypothetical protein  39.77 
 
 
178 aa  119  1.9999999999999998e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.980196  normal  0.183068 
 
 
-
 
NC_008254  Meso_0138  3-demethylubiquinone-9 3-methyltransferase  38 
 
 
156 aa  119  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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