11 homologs were found in PanDaTox collection
for query gene Rpic12D_0084 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0084  hypothetical protein  100 
 
 
84 aa  169  1e-41  Ralstonia pickettii 12D  Bacteria  normal  normal  0.761061 
 
 
-
 
NC_010682  Rpic_0076  hypothetical protein  88.1 
 
 
84 aa  130  5e-30  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4131  hypothetical protein  62.32 
 
 
67 aa  89.4  2e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0629  hypothetical protein  65.79 
 
 
73 aa  77.4  0.00000000000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4504  hypothetical protein  63.77 
 
 
72 aa  68.9  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.627459 
 
 
-
 
NC_010338  Caul_2623  hypothetical protein  48.68 
 
 
74 aa  68.9  0.00000000002  Caulobacter sp. K31  Bacteria  normal  0.279445  normal 
 
 
-
 
NC_013947  Snas_6196  hypothetical protein  47.89 
 
 
73 aa  68.6  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.282179  normal  0.745225 
 
 
-
 
NC_011071  Smal_2078  hypothetical protein  62.69 
 
 
76 aa  65.1  0.0000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.110902  normal 
 
 
-
 
NC_009485  BBta_3487  hypothetical protein  47.89 
 
 
71 aa  63.9  0.0000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.723246  normal  0.658702 
 
 
-
 
NC_009719  Plav_0473  hypothetical protein  57.14 
 
 
70 aa  63.5  0.0000000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2300  hypothetical protein  53.95 
 
 
73 aa  48.1  0.00004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.822506 
 
 
-
 
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