14 homologs were found in PanDaTox collection
for query gene Rpal_4434 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_4434  hypothetical protein  100 
 
 
163 aa  330  7.000000000000001e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1675  hypothetical protein  78.91 
 
 
161 aa  240  7e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.026823 
 
 
-
 
NC_007778  RPB_3796  hypothetical protein  75.61 
 
 
164 aa  237  5.999999999999999e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.199128  normal 
 
 
-
 
NC_007406  Nwi_1109  hypothetical protein  64.33 
 
 
163 aa  204  4e-52  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.199159  normal  0.198527 
 
 
-
 
NC_007925  RPC_1495  hypothetical protein  69.01 
 
 
163 aa  202  2e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.126254 
 
 
-
 
NC_007964  Nham_1342  hypothetical protein  64.02 
 
 
163 aa  196  2.0000000000000003e-49  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5522  hypothetical protein  63.24 
 
 
161 aa  180  9.000000000000001e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3043  hypothetical protein  36.05 
 
 
159 aa  73.9  0.0000000000009  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.56 
 
 
-
 
NC_011757  Mchl_3267  hypothetical protein  36.05 
 
 
159 aa  73.9  0.000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4704  hypothetical protein  33.33 
 
 
157 aa  73.9  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.00344811  n/a   
 
 
-
 
NC_010725  Mpop_3240  hypothetical protein  36.18 
 
 
159 aa  72  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.277022  normal 
 
 
-
 
NC_010511  M446_4188  hypothetical protein  35.1 
 
 
157 aa  65.1  0.0000000004  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5548  hypothetical protein  28.77 
 
 
157 aa  58.2  0.00000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.863043 
 
 
-
 
NC_009719  Plav_2554  hypothetical protein  28.35 
 
 
158 aa  49.7  0.00002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
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