6 homologs were found in PanDaTox collection
for query gene Rpal_3332 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_3332  hypothetical protein  100 
 
 
405 aa  810    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3457  hypothetical protein  35.2 
 
 
611 aa  92.8  9e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.801555  normal  0.385071 
 
 
-
 
NC_011369  Rleg2_2409  conserved hypothetical fusion protein  29.48 
 
 
823 aa  62.8  0.00000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.827209  normal 
 
 
-
 
NC_011369  Rleg2_4156  hypothetical protein  37.82 
 
 
446 aa  60.5  0.00000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.256613  normal 
 
 
-
 
NC_007406  Nwi_1474  per-hexamer repeat-containing protein  36.3 
 
 
349 aa  53.9  0.000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.375208 
 
 
-
 
NC_007406  Nwi_1618  hypothetical protein  34.06 
 
 
349 aa  44.7  0.003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.152674  normal  0.283895 
 
 
-
 
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