More than 300 homologs were found in PanDaTox collection
for query gene Rpal_3238 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0672  putative cation-transporting ATPase  65.67 
 
 
860 aa  983    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.17366 
 
 
-
 
NC_011992  Dtpsy_3444  ATPase, P-type (transporting), HAD superfamily, subfamily IC  49.39 
 
 
859 aa  655    Acidovorax ebreus TPSY  Bacteria  normal  0.0705994  n/a   
 
 
-
 
NC_011004  Rpal_3238  ATPase, P-type (transporting), HAD superfamily, subfamily IC  100 
 
 
852 aa  1661    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2944  cation transporting P-type ATPase  52.17 
 
 
858 aa  704    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2036  ATPase, P-type (transporting), HAD superfamily, subfamily IC  48.86 
 
 
857 aa  696    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.026609 
 
 
-
 
NC_008781  Pnap_3565  ATPase, P-type (transporting), HAD superfamily, subfamily IC  49.16 
 
 
870 aa  642    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4087  ATPase, E1-E2 type  51.4 
 
 
867 aa  808    Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.433519 
 
 
-
 
NC_007519  Dde_1893  ATPase, E1-E2 type  53.26 
 
 
851 aa  824    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  unclonable  0.0000048497  n/a   
 
 
-
 
NC_007614  Nmul_A1648  ATPase, E1-E2 type  51.48 
 
 
852 aa  800    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.280621  n/a   
 
 
-
 
NC_007778  RPB_2800  ATPase, E1-E2 type  85.35 
 
 
856 aa  1329    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.682914  normal  0.508404 
 
 
-
 
NC_009427  Saro_3452  ATPase, P-type (transporting), HAD superfamily, subfamily IC  59.79 
 
 
855 aa  873    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.213738  n/a   
 
 
-
 
NC_007796  Mhun_2663  ATPase, E1-E2 type  50.12 
 
 
863 aa  800    Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_0492  ATPase, E1-E2 type  54.31 
 
 
857 aa  726    Rhodoferax ferrireducens T118  Bacteria  normal  0.976573  n/a   
 
 
-
 
NC_007925  RPC_2461  ATPase, E1-E2 type  72.65 
 
 
858 aa  1148    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.159389  normal  0.258787 
 
 
-
 
NC_011884  Cyan7425_0649  ATPase, P-type (transporting), HAD superfamily, subfamily IC  49.02 
 
 
873 aa  738    Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2831  ATPase, E1-E2 type  83.93 
 
 
862 aa  1276    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.199995  normal 
 
 
-
 
NC_010581  Bind_2141  ATPase, P-type (transporting), HAD superfamily, subfamily IC  60.19 
 
 
839 aa  959    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_2556  ATPase, P-type (transporting), HAD superfamily, subfamily IC  52.17 
 
 
858 aa  704    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00124046  normal  0.779543 
 
 
-
 
NC_008553  Mthe_1471  ATPase, P-type (transporting), HAD superfamily, subfamily IC  50.12 
 
 
838 aa  787    Methanosaeta thermophila PT  Archaea  normal  0.646176  n/a   
 
 
-
 
NC_010622  Bphy_1103  ATPase, P-type (transporting), HAD superfamily, subfamily IC  45.96 
 
 
822 aa  614  9.999999999999999e-175  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4209  ATPase, P-type (transporting), HAD superfamily, subfamily IC  49.36 
 
 
840 aa  596  1e-169  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5612  ATPase, P-type (transporting), HAD superfamily, subfamily IC  47.03 
 
 
836 aa  591  1e-167  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0803944  normal 
 
 
-
 
NC_007650  BTH_II1309  cation-transporting P-ATPase PacL  49.16 
 
 
837 aa  583  1.0000000000000001e-165  Burkholderia thailandensis E264  Bacteria  normal  0.168248  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1467  putative cation-transporting ATPase  48.9 
 
 
837 aa  580  1e-164  Burkholderia pseudomallei 1106a  Bacteria  normal  0.705501  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0054  putative cation transport ATPase protein  49.03 
 
 
837 aa  582  1e-164  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1554  putative cation-transporting ATPase  49.03 
 
 
837 aa  581  1e-164  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1038  ATPase, P-type (transporting), HAD superfamily, subfamily IC  37.37 
 
 
840 aa  546  1e-154  Clostridium cellulolyticum H10  Bacteria  normal  0.375354  n/a   
 
 
-
 
NC_010001  Cphy_2132  ATPase, P-type (transporting), HAD superfamily, subfamily IC  36.36 
 
 
839 aa  541  9.999999999999999e-153  Clostridium phytofermentans ISDg  Bacteria  normal  0.221905  n/a   
 
 
-
 
NC_009975  MmarC6_0372  ATPase, P-type (transporting), HAD superfamily, subfamily IC  38.87 
 
 
834 aa  538  1e-151  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1540  ATPase, P-type (transporting), HAD superfamily, subfamily IC  39.12 
 
 
834 aa  536  1e-151  Methanococcus maripaludis C7  Archaea  normal  0.339588  normal  0.0454071 
 
 
-
 
NC_009135  MmarC5_1088  ATPase, P-type (transporting), HAD superfamily, subfamily IC  38.72 
 
 
834 aa  531  1e-149  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4474  ATPase, P-type (transporting), HAD superfamily, subfamily IC  34.75 
 
 
838 aa  505  1e-141  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3556  ATPase, P-type (transporting), HAD superfamily, subfamily IC  38.19 
 
 
836 aa  501  1e-140  Spirosoma linguale DSM 74  Bacteria  normal  0.0290899  normal  0.986505 
 
 
-
 
NC_007952  Bxe_B2097  calcium transporting P-type ATPase  36.1 
 
 
893 aa  431  1e-119  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_09790  calcium-translocating P-type ATPase, PMCA-type  32.73 
 
 
899 aa  430  1e-119  Halothermothrix orenii H 168  Bacteria  normal  0.504802  n/a   
 
 
-
 
NC_007404  Tbd_0502  cation-transporting ATPase, E1-E2 type  38.04 
 
 
880 aa  425  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.61983 
 
 
-
 
NC_010424  Daud_1863  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.78 
 
 
893 aa  426  1e-117  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2291  ATPase, P-type (transporting), HAD superfamily, subfamily IC  36.09 
 
 
872 aa  422  1e-116  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0095  cation transporter E1-E2 family ATPase  36.29 
 
 
884 aa  419  9.999999999999999e-116  Methylococcus capsulatus str. Bath  Bacteria  normal  0.668682  n/a   
 
 
-
 
NC_010003  Pmob_0991  calcium-translocating P-type ATPase, PMCA-type  32.58 
 
 
887 aa  416  9.999999999999999e-116  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1121  ATPase, P-type (transporting), HAD superfamily, subfamily IC  38.35 
 
 
885 aa  417  9.999999999999999e-116  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2661  ATPase, E1-E2 type  33.98 
 
 
896 aa  417  9.999999999999999e-116  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.931325 
 
 
-
 
NC_010320  Teth514_0665  calcium-translocating P-type ATPase, PMCA-type  32.87 
 
 
917 aa  414  1e-114  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2353  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.03 
 
 
898 aa  412  1e-113  Psychromonas ingrahamii 37  Bacteria  normal  0.234065  decreased coverage  0.00179475 
 
 
-
 
NC_011658  BCAH187_A0519  cation-transporting ATPase, E1-E2 family  32.72 
 
 
888 aa  411  1e-113  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2666  ATPase, P-type (transporting), HAD superfamily, subfamily IC  31.9 
 
 
864 aa  411  1e-113  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0153597  n/a   
 
 
-
 
NC_003909  BCE_0519  cation transporter E1-E2 family ATPase  32.16 
 
 
888 aa  407  1.0000000000000001e-112  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1452  ATPase, P-type (transporting), HAD superfamily, subfamily IC  34.91 
 
 
914 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.244915  n/a   
 
 
-
 
NC_009767  Rcas_0372  ATPase, P-type (transporting), HAD superfamily, subfamily IC  34.84 
 
 
915 aa  407  1.0000000000000001e-112  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1436  ATPase, E1-E2 type  36.85 
 
 
909 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1543  ATPase, P-type (transporting), HAD superfamily, subfamily IC  36.14 
 
 
890 aa  407  1.0000000000000001e-112  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.260017  n/a   
 
 
-
 
NC_011725  BCB4264_A0470  cation-transporting ATPase, E1-E2 family  32.38 
 
 
888 aa  406  1e-111  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0391  cation transporter E1-E2 family ATPase  32.31 
 
 
888 aa  405  1e-111  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0382  cation-transporting ATPase A, P type (ATPase, E1-E2 type)  32.42 
 
 
888 aa  405  1e-111  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0379  cation-transporting ATPase A, P type (ATPase, E1-E2 type)  32.61 
 
 
888 aa  404  1e-111  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0405  cation transporter E1-E2 family ATPase  32.31 
 
 
888 aa  405  1e-111  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0385  ATPase, P-type (transporting), HAD superfamily, subfamily IC  31.39 
 
 
888 aa  404  1e-111  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4854  cation-transporting ATPase, E1-E2 family  32.31 
 
 
888 aa  403  1e-111  Bacillus cereus G9842  Bacteria  normal  0.468494  normal 
 
 
-
 
NC_011899  Hore_21960  cation-transporting ATPase A, P type (ATPase, E1-E2 type)  33.07 
 
 
894 aa  403  1e-111  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0449  cation-transporting ATPase, E1-E2 family  32.31 
 
 
888 aa  405  1e-111  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2172  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.41 
 
 
895 aa  404  1e-111  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.66095 
 
 
-
 
NC_009253  Dred_1692  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.45 
 
 
916 aa  403  1e-111  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1315  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.3 
 
 
906 aa  400  9.999999999999999e-111  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2691  ATPase, P-type (transporting), HAD superfamily, subfamily IC  36.39 
 
 
905 aa  402  9.999999999999999e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0896  cation transport ATPase  34.7 
 
 
899 aa  401  9.999999999999999e-111  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5102  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.68 
 
 
899 aa  402  9.999999999999999e-111  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.527436 
 
 
-
 
NC_008262  CPR_2026  cation-transporting atpase pacl  30.94 
 
 
849 aa  399  9.999999999999999e-111  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1123  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.88 
 
 
904 aa  397  1e-109  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.91137 
 
 
-
 
NC_007484  Noc_2130  cation transporting ATPase, E1-E2 type  36.62 
 
 
884 aa  399  1e-109  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0188  calcium-translocating P-type ATPase, PMCA-type  31.24 
 
 
898 aa  396  1e-109  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1665  ATPase, E1-E2 type  35.76 
 
 
889 aa  398  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3973  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.85 
 
 
904 aa  398  1e-109  Marinobacter aquaeolei VT8  Bacteria  normal  0.704613  n/a   
 
 
-
 
NC_008261  CPF_2311  ATPase, P-type (transporting), HAD superfamily, subfamily IC  30.82 
 
 
849 aa  397  1e-109  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1070  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.44 
 
 
903 aa  399  1e-109  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00103612  n/a   
 
 
-
 
NC_011661  Dtur_0892  calcium-translocating P-type ATPase, PMCA-type  31.57 
 
 
870 aa  398  1e-109  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.558201  n/a   
 
 
-
 
NC_008639  Cpha266_0173  ATPase, P-type (transporting), HAD superfamily, subfamily IC  34.32 
 
 
890 aa  399  1e-109  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3615  cation transporter E1-E2 family ATPase  31.22 
 
 
906 aa  393  1e-108  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2237  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.46 
 
 
896 aa  393  1e-108  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3920  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.83 
 
 
907 aa  395  1e-108  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008789  Hhal_1861  ATPase, P-type (transporting), HAD superfamily, subfamily IC  34.12 
 
 
917 aa  396  1e-108  Halorhodospira halophila SL1  Bacteria  normal  0.274545  n/a   
 
 
-
 
NC_013216  Dtox_2753  ATPase, P-type (transporting), HAD superfamily, subfamily IC  30.93 
 
 
883 aa  395  1e-108  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.19157  normal  0.993386 
 
 
-
 
NC_009674  Bcer98_2526  ATPase, P-type (transporting), HAD superfamily, subfamily IC  30.61 
 
 
907 aa  393  1e-108  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1761  cation-transporting ATPase  34.11 
 
 
919 aa  390  1e-107  Methylococcus capsulatus str. Bath  Bacteria  normal  0.694852  n/a   
 
 
-
 
NC_003909  BCE_3917  cation transporter E1-E2 family ATPase  31.22 
 
 
907 aa  389  1e-107  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3725  cation transporter E1-E2 family ATPase  31.34 
 
 
906 aa  392  1e-107  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3633  cation transporter E1-E2 family ATPase  31.22 
 
 
906 aa  391  1e-107  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0500  cation-transporting ATPase  33 
 
 
914 aa  391  1e-107  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010001  Cphy_0632  ATPase, P-type (transporting), HAD superfamily, subfamily IC  30.4 
 
 
877 aa  392  1e-107  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3888  cation-transporting ATPase, E1-E2 family  31.22 
 
 
906 aa  391  1e-107  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000478735 
 
 
-
 
NC_012918  GM21_1989  ATPase, P-type (transporting), HAD superfamily, subfamily IC  35.37 
 
 
898 aa  391  1e-107  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00102475 
 
 
-
 
NC_007517  Gmet_1614  cation transporter E1-E2 family ATPase  35.85 
 
 
871 aa  390  1e-107  Geobacter metallireducens GS-15  Bacteria  normal  0.0657818  normal 
 
 
-
 
NC_007530  GBAA_4012  cation transporter E1-E2 family ATPase  31.34 
 
 
906 aa  392  1e-107  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_0197  ATPase, P-type (transporting), HAD superfamily, subfamily IC  32.65 
 
 
888 aa  390  1e-107  Thermofilum pendens Hrk 5  Archaea  normal  0.846204  n/a   
 
 
-
 
NC_007778  RPB_1268  ATPase, E1-E2 type  34.37 
 
 
913 aa  392  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.652598 
 
 
-
 
NC_009012  Cthe_1917  ATPase, P-type (transporting), HAD superfamily, subfamily IC  33.79 
 
 
905 aa  392  1e-107  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000324305  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3697  ATPase, P-type (transporting), HAD superfamily, subfamily IC  31.72 
 
 
907 aa  389  1e-107  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2230  ATPase, P-type (transporting), HAD superfamily, subfamily IC  32.59 
 
 
891 aa  387  1e-106  Thermoanaerobacter sp. X514  Bacteria  normal  0.693081  n/a   
 
 
-
 
NC_011772  BCG9842_B1270  cation-transporting ATPase, E1-E2 family  31.11 
 
 
907 aa  388  1e-106  Bacillus cereus G9842  Bacteria  normal  0.0425948  normal 
 
 
-
 
NC_008228  Patl_2286  ATPase, P-type (transporting), HAD superfamily, subfamily IC  32.85 
 
 
904 aa  388  1e-106  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0985  hypothetical protein  34.91 
 
 
844 aa  387  1e-106  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.446349 
 
 
-
 
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