8 homologs were found in PanDaTox collection
for query gene Rpal_3052 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_3052  hypothetical protein  100 
 
 		 303 aa  616  1e-175  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.833159  n/a   
 
 
-
 
NC_007510  Bcep18194_A5241  hypothetical protein  37.36 
 
 		 151 aa  59.7  0.00000005  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010658  SbBS512_E2159  replication protein  33.72 
 
 		 274 aa  59.7  0.00000006  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000201859  n/a   
 
 
-
 
NC_011353  ECH74115_1152  hypothetical protein  36.99 
 
 		 400 aa  58.9  0.00000009  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.303869 
 
 
-
 
NC_010172  Mext_1874  hypothetical protein  33.73 
 
 		 315 aa  51.6  0.00001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3957  hypothetical protein  33.33 
 
 		 264 aa  44.3  0.002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_3493  hypothetical protein  34.25 
 
 		 224 aa  43.9  0.004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_2904  hypothetical protein  35.62 
 
 		 332 aa  43.1  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0650745  normal  0.240058 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>