9 homologs were found in PanDaTox collection
for query gene Rpal_2120 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2120  hypothetical protein  100 
 
 
150 aa  288  2e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0217734  n/a   
 
 
-
 
NC_007778  RPB_0034  hypothetical protein  78.32 
 
 
148 aa  221  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.26926  normal 
 
 
-
 
NC_007925  RPC_2963  hypothetical protein  72.11 
 
 
148 aa  214  4e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.257701  normal 
 
 
-
 
NC_007958  RPD_3089  hypothetical protein  76.71 
 
 
148 aa  211  2.9999999999999995e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.693168  normal  0.0494541 
 
 
-
 
NC_009784  VIBHAR_06477  hypothetical protein  48.48 
 
 
154 aa  124  3e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003295  RSc1848  hypothetical protein  48.57 
 
 
151 aa  120  9e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0188402  normal  0.0439501 
 
 
-
 
NC_007643  Rru_A1442  putative lipoprotein  48.23 
 
 
159 aa  105  2e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.425847  n/a   
 
 
-
 
NC_009092  Shew_3149  putative lipoprotein  40.97 
 
 
152 aa  97.1  8e-20  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1104  putative lipoprotein  43.97 
 
 
152 aa  80.9  0.000000000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.943049 
 
 
-
 
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